PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017106.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 558aa MW: 61418.2 Da PI: 6.4668

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017106.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.6	9.6e-16	356	407	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Oeu017106.1 356 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 407 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MAPENIWLSF SLPSLEMIDS CSLATMELAP FETSSAAASH HLYSFADNFN ANGSYNQNSR 60 AIYSEAENHQ AKENNSINFT SYMDPYMHQN MQPQPKLEDF FGGDSTETQD SSLTHIYDHH 120 QTGGDDSYFS NNEQQDLKTI NGFQAFSTNS GSEVDDSAFA GHTQSPVEPG IELVAHCPIT 180 ASASATNTNA LSLGVDDNAQ CSESNNKTIV CVDSERNCKR VTNTFGQRTS IYRGVTRHRW 240 TGRYEAHLWD NSCRREGQAR RGRQVFLSLL HIGRNGFDQA ITFPPYFVVY LGGYDKEDKA 300 ARAYDLAALK YWGVTATINF PIANYTRELE EMKHATKQEF IASLRRKSSG FSRGASIYRG 360 VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI AAIKFRGVNA VTNFEMSRYD 420 VEAIVKSSLP VGGTAKRLKL SLEAKEKCPT NANLQIQSSS NSINFAPLKQ SVSTVPHGIP 480 FDVNFFHHLH PTNAGVSAAA PTVVKAGMLS ITCAPRFSGF AIVEIGVDDE VQGSAKIVED 540 NIIGGLESTV RSKEVLK*

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MAPENIWLSF SLPSLEMIDS CSLATMELAP FETSSAAASH HLYSFADNFN ANGSYNQNSR  60
AIYSEAENHQ AKENNSINFT SYMDPYMHQN MQPQPKLEDF FGGDSTETQD SSLTHIYDHH  120
QTGGDDSYFS NNEQQDLKTI NGFQAFSTNS GSEVDDSAFA GHTQSPVEPG IELVAHCPIT  180
ASASATNTNA LSLGVDDNAQ CSESNNKTIV CVDSERNCKR VTNTFGQRTS IYRGVTRHRW  240
TGRYEAHLWD NSCRREGQAR RGRQVFLSLL HIGRNGFDQA ITFPPYFVVY LGGYDKEDKA  300
ARAYDLAALK YWGVTATINF PIANYTRELE EMKHATKQEF IASLRRKSSG FSRGASIYRG  360
VTRHHQQGRW QARIGRVAGN KDLYLGTFAT EEEAAEAYDI AAIKFRGVNA VTNFEMSRYD  420
VEAIVKSSLP VGGTAKRLKL SLEAKEKCPT NANLQIQSSS NSINFAPLKQ SVSTVPHGIP  480
FDVNFFHHLH PTNAGVSAAA PTVVKAGMLS ITCAPRFSGF AIVEIGVDDE VQGSAKIVED  540
NIIGGLESTV RSKEVLK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.3	1e-127	AP2 family protein