PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017068.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 396aa MW: 45072.1 Da PI: 9.6908

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017068.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.2	3.2e-11	70	126	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n k+k + g ++ +e Aa+a++ a+ k++g Oeu017068.1 70 SRFRGVSRHRWTGRYEAHLWDkGTWNVtqKKKGKQ-GAYDEEEAAARAYDLAAIKYWG 126 789****************77777784446666.9*****************98 PP
2	AP2	50.7	4.4e-16	169	220	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Oeu017068.1 169 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 220 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MEICAKSETK PEKCSISVDV QETKSGKRRR RSPPVVAFRY NNQQIEQQHP QAIRVDQTAA 60 ATTTTTKRSS RFRGVSRHRW TGRYEAHLWD KGTWNVTQKK KGKQGAYDEE EAAARAYDLA 120 AIKYWGTSTF TNFPISDYNK EREIMQNVTR EEYLASLRRR SSGFARGVSK YRGVARHHHN 180 GRWEARIGRV FGNKYLYLGT YSTQEEAAHA YDIAAIEYRG INAVTNFDLS TYIRWLRPDA 240 NSVGFQGLIS ENEAQQSNYN YTNNANKETK FSTPNSFAIN NPVISQKHEI IERKMPLSPC 300 NKTSSPTALG LLHRSSMFKD LVEKTSSASN EETEKDKTEI KLHTGGEEDN FVFYNGKNHI 360 TNYACPSNME KLPRLDPLEN DASSLYNGGG QPFWT*

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MEICAKSETK PEKCSISVDV QETKSGKRRR RSPPVVAFRY NNQQIEQQHP QAIRVDQTAA  60
ATTTTTKRSS RFRGVSRHRW TGRYEAHLWD KGTWNVTQKK KGKQGAYDEE EAAARAYDLA  120
AIKYWGTSTF TNFPISDYNK EREIMQNVTR EEYLASLRRR SSGFARGVSK YRGVARHHHN  180
GRWEARIGRV FGNKYLYLGT YSTQEEAAHA YDIAAIEYRG INAVTNFDLS TYIRWLRPDA  240
NSVGFQGLIS ENEAQQSNYN YTNNANKETK FSTPNSFAIN NPVISQKHEI IERKMPLSPC  300
NKTSSPTALG LLHRSSMFKD LVEKTSSASN EETEKDKTEI KLHTGGEEDN FVFYNGKNHI  360
TNYACPSNME KLPRLDPLEN DASSLYNGGG QPFWT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-74	AP2 family protein