PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016994.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 270aa MW: 29105.6 Da PI: 8.1764

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016994.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.001	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu016994.1 112 YQCKTCNRCFPSFQALGGHRASH 134 9***********99999998887 PP
2	zf-C2H2	13.9	0.00016	179	201	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Oeu016994.1 179 HECSICGAEFSSGQALGGHMRRH 201 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MGAKEHRHKI KGKRAKRSRP SSPLALTMAT TSSCSTAASD GGFGGASDIS GSFDRFAALP 60 PNSHEHTDEE EDMANCLILL AKGHTRKPSE PAAAEASTSN KTAAVAAAAE VYQCKTCNRC 120 FPSFQALGGH RASHKKPKPT TLEQNPQNFQ FNYDQRTILS LQISSKNSGC NPQNKSRIHE 180 CSICGAEFSS GQALGGHMRR HRPMPLATVA PDSSHEESKE ATKPRNLLSL DLNLPAPEPE 240 DDDLRETKFS FASKEIIVFS ASPLVDCHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	9e-51	C2H2 family protein