PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016399.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 300aa    MW: 34864.9 Da    PI: 8.6161
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016399.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-16142187248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        WT eEd  l+++v+++G + W+ Ia+++  gR +kqc++rw+++l
      Oeu016399.1 142 TQWTVEEDRVLIHLVEKFGQRKWSHIAQMLK-GRIGKQCRERWHNHL 187
                      68****************************9.*************97 PP
2Myb_DNA-binding57.63e-18193235145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ W++eEd++l++a+++ G++ W+ Ia++++ +Rt++++k++w+
      Oeu016399.1 193 KDVWSEEEDKILIEAHAKVGNK-WSEIAKKLP-RRTENSIKNHWN 235
                      578*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESQTRCEND QNVPPTPIGL SYNNSIKQEI RSEGDEFCME SFSSRGYLQD FHHLDHNFSS  60
FDLDGYDPFD AFLHASWSKD FDFDKFKVFE ETDDDGAGMQ NFQAENDHHK KSDTEKKKKC  120
NGNIDESQFA LAGRNANKSA KTQWTVEEDR VLIHLVEKFG QRKWSHIAQM LKGRIGKQCR  180
ERWHNHLRPD IKKDVWSEEE DKILIEAHAK VGNKWSEIAK KLPRRTENSI KNHWNATKRR  240
QFSKRKPRTK WPRPSTLLQD YIQSLNLGKG DSRRNAQPPD AHPGILINNS FPDVKIIQG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.13e-71MYB family protein