PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016281.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 477aa MW: 52746.2 Da PI: 8.3294

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016281.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.0008	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk +s ++ +H t+ Oeu016281.1 129 FECPVCGKGYSFEEEVSSHVETC 151 89*****************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDEMKGKMKG FMKKVNNPFS SSSSEKFKGQ GRVLGSSSSS PPSRGPANFD ATRPPQSLST 60 PKQNQSLSSN SKPATQKLSN NSEQKIEDKK PAIRVESDGN EKSENGFDPF NSLITSGKRN 120 PNGYTLKVFE CPVCGKGYSF EEEVSSHVET CLNNSVSRNL RDSEKEIEDS KNEVEACFTA 180 YLSGNPSAGS LDVVLKLLKN IVKEPDNTKF RKIRMGNPKV KDAIGDILGG VELFEFMGFE 240 LKEESGEMWL VMDAPSEERL GLVKNVISLL EPKKVEEPSS AAPANLGEPM EPKKVDRQTR 300 VFCSVPESVA AKIELPDSFY NLSAEELRRE ADMRKKKIEE SKLLIPKSYR EKQAKAAKKR 360 YNRTVIRIQF PDGVVLQGIF SPTEPTGALY EFVSSALKEP RLKFELIHPV LIKRRVIPHF 420 SAAGGRNVTF EEEDLVPSAL VKFKPIETDT VVFTGLCNEL LEIIEPLKTG SAVPSV*

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDEMKGKMKG FMKKVNNPFS SSSSEKFKGQ GRVLGSSSSS PPSRGPANFD ATRPPQSLST  60
PKQNQSLSSN SKPATQKLSN NSEQKIEDKK PAIRVESDGN EKSENGFDPF NSLITSGKRN  120
PNGYTLKVFE CPVCGKGYSF EEEVSSHVET CLNNSVSRNL RDSEKEIEDS KNEVEACFTA  180
YLSGNPSAGS LDVVLKLLKN IVKEPDNTKF RKIRMGNPKV KDAIGDILGG VELFEFMGFE  240
LKEESGEMWL VMDAPSEERL GLVKNVISLL EPKKVEEPSS AAPANLGEPM EPKKVDRQTR  300
VFCSVPESVA AKIELPDSFY NLSAEELRRE ADMRKKKIEE SKLLIPKSYR EKQAKAAKKR  360
YNRTVIRIQF PDGVVLQGIF SPTEPTGALY EFVSSALKEP RLKFELIHPV LIKRRVIPHF  420
SAAGGRNVTF EEEDLVPSAL VKFKPIETDT VVFTGLCNEL LEIIEPLKTG SAVPSV*