PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016131.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 312aa    MW: 35409.8 Da    PI: 7.1886
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016131.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+d+v++ G g+W+  ++  g+ R++k+c++rw +yl
      Oeu016131.1 14 KGPWTPEEDQKLIDYVHKNGCGNWRILPKNAGLQRCGKSCRLRWANYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.78.3e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++  E+e ++++++ lG++ W++Ia +++ gRt++++k++w+++
      Oeu016131.1  67 RGKFSSLEEEAIIQLHRILGNK-WSAIAGRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGRTPCCAKT GLKKGPWTPE EDQKLIDYVH KNGCGNWRIL PKNAGLQRCG KSCRLRWANY  60
LRPDIKRGKF SSLEEEAIIQ LHRILGNKWS AIAGRLPGRT DNEIKNYWNT HIRKKLLRMG  120
IDPVTHYPRL DLLEISEFLN SSSQLNFSKF QPLVNSNLLG SATSLSSQNQ YFLQQNNVVL  180
ETQLFDNSHV QNQNQIPTLI QPCHFQSQNH QDFLGFNGMP LPFTFPEENY VPAVTNYVYE  240
YYGSGQSIVD PPSSETSTFQ SGFSNMPTPS SSSTTLHSNS TYITEDIERE SNCSNMLNFQ  300
ISDILDVNEF V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.12e-97MYB family protein