PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu015334.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 210aa MW: 23391 Da PI: 8.496 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.5 | 2.4e-05 | 12 | 34 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++C+k Fs+k L H++ H Oeu015334.1 12 YGCKYCNKEFSSKQALGGHQNGH 34 67*****************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 210 aa Download sequence |
MNVTDLVKER VYGCKYCNKE FSSKQALGGH QNGHKVERVT ERNARKGLKT SFGHGMNSLP 60 FQSSFNTGPE IFNQSTRNRF YNPQNMQQRM LADGQPNSNL PMTREPHAHE PLQEFSHGYP 120 IWPNHHLTDS QFIAASTGME NHTLNFSNLT FGTASSKTRT MLGVSGGIAT VNSSQSIHDT 180 NLRAEINSQI TDSTNQQCPY SELDLSLKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25160.1 | 5e-11 | C2H2 family protein |