PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015016.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 313aa    MW: 35351.6 Da    PI: 9.6367
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015016.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.34.2e-092470347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE +++ +a +++ ++   +W  +a++++ g+t  +++  + k+
      Oeu015016.1 24 KWTPEENKRFENALALFDKDtpdRWYNVAAMIP-GKTVSDVIKQYMKL 70
                     8********************************.*********99987 PP
2Myb_DNA-binding44.34.1e-14129173347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G g+W+ I+r + ++Rt+ q+ s+ qky
      Oeu015016.1 129 PWTQEEHRQFLLGLKKYGRGDWRNISRNFVTTRTPTQVASHAQKY 173
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGFLSPASRV STSNWMFQDS KVTKWTPEEN KRFENALALF DKDTPDRWYN VAAMIPGKTV  60
SDVIKQYMKL VEDVSDIEAG LIPIPGYTND SLTMDWVNSL GYDGLRKGVA CSRNSSARSS  120
EHERKKGVPW TQEEHRQFLL GLKKYGRGDW RNISRNFVTT RTPTQVASHA QKYFIRQLSG  180
RKDKKRSSIH DITTVNLIEV KSDTDRPHAP DKSTLVRHFQ QNIDSNQPNE GGTKASNLPN  240
NSLITTHLPG TPSFAVLNQR NHHMQSISPC VLELGHHGTV FRMPPTPHER FHNADRNQVQ  300
SYSTSCEGVY EG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-105MYB family protein