PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014819.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 502aa MW: 56074.8 Da PI: 6.9851

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014819.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51.1	3.2e-16	152	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+ +++a+ k++g Oeu014819.1 152 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARVYDRAAIKFRG 201 78*****************......55**********************998 PP
2	AP2	42.9	1.2e-13	243	293	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g Oeu014819.1 243 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 293 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MWNLNDSPDQ TRADDTDGYT DDKLKGVDSV SNSSSSAVVI EDASEDEVAE RGRKKRSSKI 60 FGFSVAHNDD DRNPCSSECK WLVTRQFFPV DESETGATSS DRPLEFPQAQ RFGVNLSTSE 120 PHGAGGRGFG KSAAEVAQPL KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG 180 GFDTAHAAAR VYDRAAIKFR GTEADINFNL EDYEDVKQMS NLTKEEFVHV LRRQSTGFPK 240 GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEVEA ARAYDKAAIK CNGKDAVTNF 300 DASIYDEELR GAESSNNAEY HNLDLSLGNA ASKCSSRELE DENHDQHCST MPFEFDLRLQ 360 GSRSELNFQN GLGQIDRRDG YNENDTLQLL SQTHLHSPGS LKVNELHQYR QFMEGNEPRM 420 LMFSSPVGSQ SYRNQLPSCS NGGGIRGNGE VISISTNDQL WQTKSPQLFA TAAASSGFGQ 480 QILRPQNWLH KSIVRPLTRP S*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MWNLNDSPDQ TRADDTDGYT DDKLKGVDSV SNSSSSAVVI EDASEDEVAE RGRKKRSSKI  60
FGFSVAHNDD DRNPCSSECK WLVTRQFFPV DESETGATSS DRPLEFPQAQ RFGVNLSTSE  120
PHGAGGRGFG KSAAEVAQPL KKSRRGPRSR SSQYRGVTFY RRTGRWESHI WDCGKQVYLG  180
GFDTAHAAAR VYDRAAIKFR GTEADINFNL EDYEDVKQMS NLTKEEFVHV LRRQSTGFPK  240
GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEVEA ARAYDKAAIK CNGKDAVTNF  300
DASIYDEELR GAESSNNAEY HNLDLSLGNA ASKCSSRELE DENHDQHCST MPFEFDLRLQ  360
GSRSELNFQN GLGQIDRRDG YNENDTLQLL SQTHLHSPGS LKVNELHQYR QFMEGNEPRM  420
LMFSSPVGSQ SYRNQLPSCS NGGGIRGNGE VISISTNDQL WQTKSPQLFA TAAASSGFGQ  480
QILRPQNWLH KSIVRPLTRP S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-116	AP2 family protein