PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu014617.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 544aa MW: 59923.6 Da PI: 5.629 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 37 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l Oeu014617.2 37 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 84 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4e-15 | 90 | 133 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ l+++++++ G++ W++ a+ ++ gRt++++k++w++ Oeu014617.2 90 KGAFTSEEERLIIELHAKIGNK-WARMAANLP-GRTDNEIKNYWNT 133 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence |
MSCSISADSK EQSADSALFD ERGSYGGSSN GGVVLKKGPW TSAEDAILVD YVKKHGEGNW 60 NAVQKHSGLS RCGKSCRLRW ANHLRPNLKK GAFTSEEERL IIELHAKIGN KWARMAANLP 120 GRTDNEIKNY WNTRIKRRQR VGLPLYPPEL CMQAMQENEQ NLNASGIPGG DTECHNLLQS 180 NGYQIPDVTF DSLNTNQGVL PYVPEFPDSS ASSLLMKGLN SQFHSFIPHI PRRQKRTREP 240 DECVSWYSNS TSDDIPSLDR VQNDGYQNKM SQLAVPCFPY DPDPVTKKLL SFGVNHSHSI 300 LNGNFSASKP TAGAVKLELP SLQRQETSLD RWKSPPLPPV HELVDSFIQS PQSVPLPSDC 360 PSPRSSGLLE ALVYEANSLG NSRNQSSEKS KSSSMTSHNN VTDSSAFKTS STEFRDYHDA 420 KSPLGNSIGS ILSECTPRCD NGSSLDENIP GIEQSWTLDG EKREYLNQLQ NSRPDAVIGS 480 CWLEQSTFCL KEHGTVMDDI TALLGDDLDT EVKDTIPGTS ALSSEWCLTW NNMPAVSQIS 540 ELP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 1e-106 | MYB family protein |