PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014221.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 320aa    MW: 36378.1 Da    PI: 5.7078
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014221.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.12e-182673148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd+ l++++ q+G g+W++ a+  g++Rt+k+c++rw++yl
      Oeu014221.1 26 RGPWTFEEDLALINYISQHGEGRWNSLAQSAGLKRTGKSCRLRWLNYL 73
                     89********************************************97 PP
2Myb_DNA-binding50.54.7e-1679122146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
      Oeu014221.1  79 RGNITLEEQLLILELHSRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 122
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDFYHGELDG ANFNNQISEE EMELRRGPWT FEEDLALINY ISQHGEGRWN SLAQSAGLKR  60
TGKSCRLRWL NYLRPDVRRG NITLEEQLLI LELHSRWGNR WSKIAQYLPG RTDNEIKNYW  120
RTRVQKHAKQ LKCDVNSKRF KDTMRYLWMP RLVERIQAAA AAAAAGGASS TTQYKPISHN  180
ISSIDNRGPS QKGLPVPQAN NSNMVGNYGG GIFPVNTNAT SYTAENSSTA ASSDSFGTPV  240
SDLTDCYNYA VNQNTNQDYY PANQLAYGET LTSPTGYFNQ GLDFTVMEQN NQWMDEGNIY  300
ENLWNDDDLF LQQQFNNNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.13e-86MYB family protein