PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014161.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 347aa MW: 38458.9 Da PI: 7.3848

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014161.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.2e-07	11	51	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ +++ +++ fC+ + +lC+dC H H Oeu014161.1 11 KLCNSCKSSPASVFCRADTAFLCHDCDARVHDAnkaasrHA 51 68*************************99994345555665 PP
2	zf-B_box	26.1	1.8e-08	54	97	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 +C+ +e+ +++ C+ + lC++C +H+ H++ p Oeu014161.1 54 LVCEVCEQAPAIVTCKADAAALCATCDRDIHSAnplasrHERLP 97 68*****************************6688888898876 PP
3	CCT	70	5.8e-24	291	335	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++e Oeu014161.1 291 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSE 335 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGGESWSLTA KLCNSCKSSP ASVFCRADTA FLCHDCDARV HDANKAASRH ARVLVCEVCE 60 QAPAIVTCKA DAAALCATCD RDIHSANPLA SRHERLPVVP FYEPSQNNIN NENKCFSEDE 120 AEAASWLLPT PHMKGGTSED DDSDSPKYKS GQYLFSDMDP RLDLGIISGD QKKQHRTNDP 180 KHCQYSSDGV VPVQNKNDFQ QNPFQGPVVN GFPTFDTDYN TGSKPFMYNF SSQSISQSNK 240 GLELNSLEYQ QQKVSSSSLE VGVVPDPSSM ADVSTLVKND GFPNPVSGMD REARVLRYRE 300 KRKNRKFEKT IRYASRKAYA ETRPRIKGRF AKRSENGIES LMVPTF*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGGESWSLTA KLCNSCKSSP ASVFCRADTA FLCHDCDARV HDANKAASRH ARVLVCEVCE  60
QAPAIVTCKA DAAALCATCD RDIHSANPLA SRHERLPVVP FYEPSQNNIN NENKCFSEDE  120
AEAASWLLPT PHMKGGTSED DDSDSPKYKS GQYLFSDMDP RLDLGIISGD QKKQHRTNDP  180
KHCQYSSDGV VPVQNKNDFQ QNPFQGPVVN GFPTFDTDYN TGSKPFMYNF SSQSISQSNK  240
GLELNSLEYQ QQKVSSSSLE VGVVPDPSSM ADVSTLVKND GFPNPVSGMD REARVLRYRE  300
KRKNRKFEKT IRYASRKAYA ETRPRIKGRF AKRSENGIES LMVPTF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	5e-90	CO-like family protein