PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013763.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-PHD

Protein Properties

Length: 731aa MW: 81167.2 Da PI: 4.5597

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013763.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	36.3	9.7e-12	575	616	11	52
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++L e F++n+yp ++ +e LAk+l+Lt +qV+ WF N R Oeu013763.2 575 VTQRLLESFRQNQYPERAVKENLAKELELTIQQVTKWFENTR 616 6899************************************99 PP
2	PHD	37.4	5.7e-13	216	271	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ +++++++lCdg C++ fH+ Cl+++l ++++p + +wlC+ C++k Oeu013763.2 216 FCSKCGSkdITTGNDIILCDGaCERGFHQFCLEPPLLKQDIPPDdeSWLCPGCDCK 271 699*966567****66**************999999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MTLSSVIENL EVSSENKAIT VVLALGYFET PCGRTSVNTL PGQAGAMEKN LNKDTSLLKA 60 EEEGTPVQFR TSKNSVNNKW VLRSKSQEKP KASDPKDTTV QDNANGEKKR RGRKRKEMNK 120 GPVNEFSRTR THLRYLMHRI RYEQNLIDAY SAEGWKRQSL EKLKPEKELQ RAKSHILDYK 180 LRIRELFQGL DLSLAVGKLP ASLFDSAGEI DSEDIFCSKC GSKDITTGND IILCDGACER 240 GFHQFCLEPP LLKQDIPPDD ESWLCPGCDC KVDCIGYLND FQGTNLSVID SWEKIFPEAT 300 ASVSGKKLDD GSGSLSDDSE DDDYDPDKPD TVLKVSGDGL SNDKSGDQSS SDDSDYLLAS 360 DDLTASPNTK QYLGLPSDDS EDDDFDPAAP VQDEEVEQDS SSSDFTSDSE DLGALLDDAA 420 APEISPVLGA DEEKSKAGKV KSQSLRGELS YLLETSDAPL SGKRRVERLD YKKLNDETNG 480 NSSSESSDED FEDIPSQKRR KINREKADVV SPDKTPLAGN EMDYSKDENP KESEHGSERA 540 SENVLDNDTI NAPAETGSVR ANVKRSAPKR LGEAVTQRLL ESFRQNQYPE RAVKENLAKE 600 LELTIQQVTK WFENTRWSFN HRPQMELKKT ETDSKQGTSL NHDNKKRPDL ESESVAKDNS 660 SSGVAKLVTE AASGYKSGMP KSRKRESKTD QSPDTQIQEQ NMLVDAPSSE ENRHAGPPLF 720 HWIWQSLENE *

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MTLSSVIENL EVSSENKAIT VVLALGYFET PCGRTSVNTL PGQAGAMEKN LNKDTSLLKA  60
EEEGTPVQFR TSKNSVNNKW VLRSKSQEKP KASDPKDTTV QDNANGEKKR RGRKRKEMNK  120
GPVNEFSRTR THLRYLMHRI RYEQNLIDAY SAEGWKRQSL EKLKPEKELQ RAKSHILDYK  180
LRIRELFQGL DLSLAVGKLP ASLFDSAGEI DSEDIFCSKC GSKDITTGND IILCDGACER  240
GFHQFCLEPP LLKQDIPPDD ESWLCPGCDC KVDCIGYLND FQGTNLSVID SWEKIFPEAT  300
ASVSGKKLDD GSGSLSDDSE DDDYDPDKPD TVLKVSGDGL SNDKSGDQSS SDDSDYLLAS  360
DDLTASPNTK QYLGLPSDDS EDDDFDPAAP VQDEEVEQDS SSSDFTSDSE DLGALLDDAA  420
APEISPVLGA DEEKSKAGKV KSQSLRGELS YLLETSDAPL SGKRRVERLD YKKLNDETNG  480
NSSSESSDED FEDIPSQKRR KINREKADVV SPDKTPLAGN EMDYSKDENP KESEHGSERA  540
SENVLDNDTI NAPAETGSVR ANVKRSAPKR LGEAVTQRLL ESFRQNQYPE RAVKENLAKE  600
LELTIQQVTK WFENTRWSFN HRPQMELKKT ETDSKQGTSL NHDNKKRPDL ESESVAKDNS  660
SSGVAKLVTE AASGYKSGMP KSRKRESKTD QSPDTQIQEQ NMLVDAPSSE ENRHAGPPLF  720
HWIWQSLENE *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	116	RRGRKRK
2	110	117	RRGRKRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	9e-85	HB-PHD family protein