PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013724.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 600aa MW: 66169.4 Da PI: 7.3139

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013724.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.6e-13	39	86	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f+ L llP++ K +K++i+ +Av YI sLq Oeu013724.1 39 MHILTERERRKKMRDMFASLHALLPQL----PAKADKSTIVDEAVSYIGSLQ 86 79999*******************6....39****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MPPPPPKQPA AAAGKKRKAA SGDDKDKGKK VVGESDHEMH ILTERERRKK MRDMFASLHA 60 LLPQLPAKAD KSTIVDEAVS YIGSLQETLE KLQKKKLDRI RGMTNSTGSI FAPKLATESR 120 EAFLADQRAS TSTTIAIPPV PKFPITTNFQ TYTSPNVVLN TFGEDAHINI CAAKKPGLFT 180 AICYVLEKYR LQVVSAQVSS NQCRSTYLIH THANGASEHF PLAIPVEEIY KLAAAEIMRW 240 PGHIGDTPST YVPSILIHIP TKLSPRVCVY VGNKLGYIIG PRAPVLDNMH EDRMVFDLKQ 300 LPQYSCFAYL STRGGFRIPR MPSSLKGWKD KWFYAIRQDP DVPFSPRWGV PDTARFCGGQ 360 AYFESLERHR QMLEELEPLV YDLDDILGDD ILELANMKGI EGSEQEVQGS PGSGSRPDEG 420 PKETSGFEAG KADQWAPGIV RTGSQQQAQQ GTPRGSVPRG PVDVVDLEDG SLPPGPSNPE 480 GCSRCHSVLS IVDKYRADVD LSNGLRALEA MALKTLGIAR GLSLKEKDES SRMADLEGAV 540 SARDLRIVDL EEERAQLLRE RERMQNDLRS AQGFWCLREA RLDVLARGKA LDGLLEDKA*

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MPPPPPKQPA AAAGKKRKAA SGDDKDKGKK VVGESDHEMH ILTERERRKK MRDMFASLHA  60
LLPQLPAKAD KSTIVDEAVS YIGSLQETLE KLQKKKLDRI RGMTNSTGSI FAPKLATESR  120
EAFLADQRAS TSTTIAIPPV PKFPITTNFQ TYTSPNVVLN TFGEDAHINI CAAKKPGLFT  180
AICYVLEKYR LQVVSAQVSS NQCRSTYLIH THANGASEHF PLAIPVEEIY KLAAAEIMRW  240
PGHIGDTPST YVPSILIHIP TKLSPRVCVY VGNKLGYIIG PRAPVLDNMH EDRMVFDLKQ  300
LPQYSCFAYL STRGGFRIPR MPSSLKGWKD KWFYAIRQDP DVPFSPRWGV PDTARFCGGQ  360
AYFESLERHR QMLEELEPLV YDLDDILGDD ILELANMKGI EGSEQEVQGS PGSGSRPDEG  420
PKETSGFEAG KADQWAPGIV RTGSQQQAQQ GTPRGSVPRG PVDVVDLEDG SLPPGPSNPE  480
GCSRCHSVLS IVDKYRADVD LSNGLRALEA MALKTLGIAR GLSLKEKDES SRMADLEGAV  540
SARDLRIVDL EEERAQLLRE RERMQNDLRS AQGFWCLREA RLDVLARGKA LDGLLEDKA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	5e-43	bHLH family protein