PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu013555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 28936.8 Da PI: 7.8571 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+teEd ll+++++++G g+W++ +++ g+ R++k+c++rw +yl Oeu013555.1 14 RGPWSTEEDTLLANYIQEHGEGHWRSLPQKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.9e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l Oeu013555.1 67 RGNISPDEEDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 112 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MGRSPCCSKV GLKRGPWSTE EDTLLANYIQ EHGEGHWRSL PQKAGLLRCG KSCRLRWMNY 60 LRPGIKRGNI SPDEEDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNHWNT HLLKKLNNAG 120 IQPKPHKDLP KPKKSTPPAS KKKTKTEVEK AAPKTTVYLP KPIRFSSVNG CDSLVVSGSG 180 SSSNEGDNNV EKESAILEVS YVPCPLFELD EDENYDRVGV YGDDQDFLNL PLIHHSDFYD 240 DVNMLEKVYD EYLQLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-64 | MYB family protein |