PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013287.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 406aa    MW: 45593.2 Da    PI: 5.3982
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013287.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS302.51e-9224022373
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPilkfs 94 
                  ++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+  f++A+ ar a+  s+++k l++ ++ ++n     +++++ +l  f++++P+++f+
  Oeu013287.1   2 EQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTCGFLRAIIARAAN--SGTCKLLTTMANVHTNlamNNHKFSIIELanFVDLTPWHRFG 97 
                  79***************************************************9..5555555444444444232333334444466*********** PP

         GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...vakrl 186
                  + +aN aIleaveg + vHi+D+++++++Q p+L++a+a+R+e +p +++T+ ++ e +      ++ee+g +L +f ++ +v +ef+++   v++ +
  Oeu013287.1  98 FTAANAAILEAVEGYSVVHIVDLSMTHCMQIPTLIDAIATRSEVAPLVKLTVAVPTEDFppmLDLSYEELGTKLVNFSRSRNVVMEFRAIpssVSNGF 195
                  ****************************************************999887798888999***********************99855566 PP

         GRAS 187 edleleeLrvkp......gEalaVnlvlqlhrll................desvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
                  ++l +e+Lr+++      gEal++n++++lh+++                 e+ s++s  r+ +L++++sl P+++++v+++ad +s+++++r+ +a 
  Oeu013287.1 196 SSL-IEQLRMQHliraenGEALVINSHMMLHYIPdetlpvvqntsstqisIETCSSNSfLRSLFLEALRSLDPTIMILVDEDADFTSNNLVHRLRSAY 292
                  655.55555554444556***************************99998666666667899************************************ PP

         GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
                  +y +  fd++++ lpr s++r+++E+  + ++i+nv+a+eg +r+er e ++kW +r+++aGF+ +++se+a +++k++l +++  g+ ++ e++ +v
  Oeu013287.1 293 NYLWIPFDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGPQRVERLEPKSKWVQRMRNAGFRGISFSEEAITEVKSMLDEHA-AGWGLKREEEDVV 388
                  ***************************.********************************************************.8999********* PP

         GRAS 360 lgWkdrpLvsvSaW 373
                  l+Wk++++v+++aW
  Oeu013287.1 389 LTWKGHNVVFATAW 402
                  ************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEQLLVHCAN AIETNDATLA QQILWVLNNI APPDGDSNQR LTCGFLRAII ARAANSGTCK  60
LLTTMANVHT NLAMNNHKFS IIELANFVDL TPWHRFGFTA ANAAILEAVE GYSVVHIVDL  120
SMTHCMQIPT LIDAIATRSE VAPLVKLTVA VPTEDFPPML DLSYEELGTK LVNFSRSRNV  180
VMEFRAIPSS VSNGFSSLIE QLRMQHLIRA ENGEALVINS HMMLHYIPDE TLPVVQNTSS  240
TQISIETCSS NSFLRSLFLE ALRSLDPTIM ILVDEDADFT SNNLVHRLRS AYNYLWIPFD  300
TVDTFLPRGS KQRQWYEADI CWKIENVIAH EGPQRVERLE PKSKWVQRMR NAGFRGISFS  360
EEAITEVKSM LDEHAAGWGL KREEEDVVLT WKGHNVVFAT AWLPI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-175GRAS family protein