PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013164.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 314aa    MW: 35705.5 Da    PI: 5.995
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013164.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.6e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ede+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
      Oeu013164.1 14 KGLWSPDEDEKLYNFITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                     678*******************************************97 PP
2Myb_DNA-binding482.9e-1567110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg +++eE++ ++ +++ lG++ W+ I+++++ gRt++++k++w++
      Oeu013164.1  67 RGMFSQEEEDMIISLHETLGNR-WAQISAHLP-GRTDNEIKNFWNS 110
                      788*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGRHSCTEKE KLRKGLWSPD EDEKLYNFIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQEEEDMIIS LHETLGNRWA QISAHLPGRT DNEIKNFWNS SLKKKLVKQG  120
IDPNTHKPLP ESRDLILQPN GLPNLANSDE IGQEFCPNNV ICYNSEQKEY DPLFLSEFQE  180
SSDPIGYHSN FVTDHDHQNN QIAGNPNSNS NYGFNSMPDL ANFNPGNFMD AHLSDSSTSR  240
ICSYLSSSHS SNVNSHTAIQ ANNMMTSPET SLWDFDKKFG SMFQFQLKDE ENSSSWQEGT  300
SSYIFKNSKD FSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-76MYB family protein