PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013047.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 424aa MW: 47376.9 Da PI: 4.7395

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013047.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.6	9.5e-16	54	112	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+ ++ a++k++g Oeu013047.1 54 IFRGVTRHRWTGRFEAHLWDkSTWNNiqnKKgKQIYLGAYDNEESAARTYDLAALKYWG 112 69****************666699977447***********************98 PP
2	AP2	52	1.7e-16	155	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I +s +k+ +lg+f t eeAa+a+++a+ +++g Oeu013047.1 155 SKYRGVARHHHNGRWEARIGRVSG---NKYLYLGTFSTQEEAAAAYDRAAIEFRG 206 89**99******999754...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MKRPHPPSYS SASSSSSSSC INSTKTQKKS QPKRVRPKKI QNAAADSNKS RSSIFRGVTR 60 HRWTGRFEAH LWDKSTWNNI QNKKGKQIYL GAYDNEESAA RTYDLAALKY WGPGTPMNFP 120 LEMYSAETEE MQKMTKEEYL ASLRRQSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVSGNK 180 YLYLGTFSTQ EEAAAAYDRA AIEFRGPNAV TNFDISKYTD KLKTFTPEVK VNQEDVQATN 240 QETSETSEVV PQMQGDETID RGTSELVPQT QGDETIDHQY HQEEEYNQMV QPSDSNLELI 300 DSMDLDVMAM MDPTEGIEYC WDNLCFDLDL YSLQIPNDPL ENNELLGLFE EKGFEDDIGS 360 IFDNSFDGND FLQDTRSGSS AGSNGVEANI SVGQSEKGRD ASITSSSPPP LPSTTTSVGS 420 NIE*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MKRPHPPSYS SASSSSSSSC INSTKTQKKS QPKRVRPKKI QNAAADSNKS RSSIFRGVTR  60
HRWTGRFEAH LWDKSTWNNI QNKKGKQIYL GAYDNEESAA RTYDLAALKY WGPGTPMNFP  120
LEMYSAETEE MQKMTKEEYL ASLRRQSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVSGNK  180
YLYLGTFSTQ EEAAAAYDRA AIEFRGPNAV TNFDISKYTD KLKTFTPEVK VNQEDVQATN  240
QETSETSEVV PQMQGDETID RGTSELVPQT QGDETIDHQY HQEEEYNQMV QPSDSNLELI  300
DSMDLDVMAM MDPTEGIEYC WDNLCFDLDL YSLQIPNDPL ENNELLGLFE EKGFEDDIGS  360
IFDNSFDGND FLQDTRSGSS AGSNGVEANI SVGQSEKGRD ASITSSSPPP LPSTTTSVGS  420
NIE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	6e-93	AP2 family protein