PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu012999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 430aa MW: 46623.4 Da PI: 4.7474 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58 | 2.2e-18 | 49 | 94 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd +l ++v ++G ++W+ Iar m+ gR++k+c++rw + Oeu012999.1 49 RGPWSPEEDVILSRLVSKFGARNWSMIARGMP-GRSGKSCRLRWCNQ 94 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 101 | 145 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++ a++ +G++ W++Ia+ ++ gRt++ +k++w++ Oeu012999.1 101 RKPFTDEEDRIILAAHAVHGNK-WASIAKLLP-GRTDNGIKNHWNST 145 789*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MEGETEQQPS ETEKLTDPLV EGIAVDVISV DDEGEEREST GGGGMGRVRG PWSPEEDVIL 60 SRLVSKFGAR NWSMIARGMP GRSGKSCRLR WCNQLDPCVK RKPFTDEEDR IILAAHAVHG 120 NKWASIAKLL PGRTDNGIKN HWNSTLRRKS VNISGLKPAS SEETLLGGDM KSFKSSEGLD 180 VTMVANQPWQ SEDEVQATRN CCAPKQYLSS DSVTIDPSAG KNLPVVYPCA EENCPVVYTS 240 AEENNPMISC PAVKVGAFNV CNPSHNSAFS RAIPMQGPLI QASKPDFGIC KFLNGACGES 300 IIPMHCGRGC CAASSGVSSM SSLLGPEFLE YEEISPFPSQ ELSAIAMDLN NIAWIRSGLE 360 NAGRLSESAS HQRVPKGPST SMNSFEQNNE NDQFWFEEPN PFTTVTKDIV SQQMTMPTIA 420 LRAEVEGLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 3e-85 | MYB family protein |