PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012968.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 363aa MW: 41157 Da PI: 6.9323

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012968.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl Oeu012968.1 14 KGLWSPEEDEKLINHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.4	1.9e-14	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg ++++E++l++++++ lG++ W+ Ia ++ gRt++++k+ w+ Oeu012968.1 67 RGTFSEDEEKLIIELHAVLGNR-WSQIATQLP-GRTDNEVKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLINHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SEDEEKLIIE LHAVLGNRWS QIATQLPGRT DNEVKNLWNS SIKKKLRQRG 120 IDPITHKHLT EIENEENASV TTKNDKKMSK GSSDDQLIAE ENAEPSSVSI DNCNNMAAPT 180 PTHNFFLNRF LISHENVTAS SQHLNCSPKT GLLMIPDGNS VFDSNSKCSE IALEFSSSMT 240 TTLPPSMSLP LDNSTGLLSV HKFQKWDCTV RNSASAKLQS NCSTFDYNDF PWEPADSEKY 300 EKEASIQEII RLSDYNQGSF LQGNTAQHQN DQDIYRQMKP ETSLRANWHQ NQQPLPAEDF 360 YT*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLINHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SEDEEKLIIE LHAVLGNRWS QIATQLPGRT DNEVKNLWNS SIKKKLRQRG  120
IDPITHKHLT EIENEENASV TTKNDKKMSK GSSDDQLIAE ENAEPSSVSI DNCNNMAAPT  180
PTHNFFLNRF LISHENVTAS SQHLNCSPKT GLLMIPDGNS VFDSNSKCSE IALEFSSSMT  240
TTLPPSMSLP LDNSTGLLSV HKFQKWDCTV RNSASAKLQS NCSTFDYNDF PWEPADSEKY  300
EKEASIQEII RLSDYNQGSF LQGNTAQHQN DQDIYRQMKP ETSLRANWHQ NQQPLPAEDF  360
YT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	1e-89	MYB family protein