PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012602.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-YC

Protein Properties

Length: 432aa MW: 47711 Da PI: 4.7983

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012602.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	80.5	2e-25	1	70	30	99
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 +k+d++vkmis+++P+l++kacelfil+ltlr+w++ae+n+r++l+++d+++a+ + fl i+ d Oeu012602.1 1 MKSDKKVKMISSDTPILFAKACELFILDLTLRAWMNAEDNSRQSLRHCDVFTAIMGEELLSFLAKIISSD 70 9**************************************************************9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MKSDKKVKMI SSDTPILFAK ACELFILDLT LRAWMNAEDN SRQSLRHCDV FTAIMGEELL 60 SFLAKIISSD RYQKEISADS HGGDTHQCPA NPMNTKERPA YPMTLQNLNS ALLMRSPEAP 120 QHLVFPPSFS AAETNYRQGS NEQTLVDCPG GTDQYPEYPM NLHNLNSALL TRSYAAPQHH 180 AFLPSFSSTE NNYRQGFNDQ TVADCRGDTN EHLANPMNFH NLNSFSLRSQ EGPQHLVFPP 240 EFSSVETNYL PDLNDQTVAD YRGDTNEHLA NPMNFHNLNS LSLRRQEEPQ HLVFPPEFSS 300 AETNYLPDLN RGLDGVLCGV VFCGGVVVDL AQLLPFLICD FDGWGGRMVV VVVWLWSTFG 360 GGFGCIGPLW VVVMVVDAGG GGGRSVICVL FCWCNVSESQ FSWCDVVVVF ARVLVWCAVT 420 AVVVIQVGGL G*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MKSDKKVKMI SSDTPILFAK ACELFILDLT LRAWMNAEDN SRQSLRHCDV FTAIMGEELL  60
SFLAKIISSD RYQKEISADS HGGDTHQCPA NPMNTKERPA YPMTLQNLNS ALLMRSPEAP  120
QHLVFPPSFS AAETNYRQGS NEQTLVDCPG GTDQYPEYPM NLHNLNSALL TRSYAAPQHH  180
AFLPSFSSTE NNYRQGFNDQ TVADCRGDTN EHLANPMNFH NLNSFSLRSQ EGPQHLVFPP  240
EFSSVETNYL PDLNDQTVAD YRGDTNEHLA NPMNFHNLNS LSLRRQEEPQ HLVFPPEFSS  300
AETNYLPDLN RGLDGVLCGV VFCGGVVVDL AQLLPFLICD FDGWGGRMVV VVVWLWSTFG  360
GGFGCIGPLW VVVMVVDAGG GGGRSVICVL FCWCNVSESQ FSWCDVVVVF ARVLVWCAVT  420
AVVVIQVGGL G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63470.2	2e-21	NF-YC family protein