PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu012601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YC | ||||||||
Protein Properties | Length: 88aa MW: 10119.8 Da PI: 8.2294 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 85.6 | 5.3e-27 | 1 | 70 | 30 | 99 |
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 +k+d++vkmis+++P+l++kace+fil+ltlr+w++ae+n+r++l++ d+++a+ + fl iv d Oeu012601.1 1 MKSDKNVKMISTDTPILFAKACEIFILDLTLRAWMNAEDNSRQSLRRRDVFTAIMGEELLSFLAKIVSSD 70 9***************************************************************999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MKSDKNVKMI STDTPILFAK ACEIFILDLT LRAWMNAEDN SRQSLRRRDV FTAIMGEELL 60 SFLAKIVSSD RYHVCPFLIT MFSIYNH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 5e-23 | NF-YC family protein |