PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012262.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 504aa MW: 55933 Da PI: 6.4201

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012262.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.7	4.5e-11	223	286	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.....kr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ +++g ++ +e+Aa+a++ a++k++g Oeu012262.1 223 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqarkgRQdfMMIYIGGYDKEEKAARAYDLAALKYWG 286 57*****************6666644786442267779********************98 PP
2	AP2	50.2	6.4e-16	329	380	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Oeu012262.1 329 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 380 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MAPENNWLSF SLSSMEMLQS TMNASSSVDS HNYYSFADNF YANGWANTKP QVMYTEAENH 60 PEKENNLIFT SYMDSELHQN MQPPPKLEDF FGGESTETQD SSSLTHIYDH PQTNGGGVAY 120 FNRSEQQDPK TITRFQAFSA NSGSEVDDSA FVGHTQSPVE SGSELVAYPQ AAITGSNTTT 180 HALSLGVNNN VQCTENNNVK AIVSVQSAEG CKKIADTFGQ RTSIYRGVTR HRWTGRYEAH 240 LWDNSCRREG QARKGRQDFM MIYIGGYDKE EKAARAYDLA ALKYWGPTAT TNFPISNYTK 300 ELEEMKHATK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 360 FATEEEAAEA YDIAAIKFRG LNAVTNFEMS RYDVEAIANS SLPIGGTAKR LKLSLEAEEK 420 PPMSLPCSSS INFGAVQPVS VSTIPYGLPY DTTAPFYHHH HLFQHLQASN AGASADTSMV 480 TPMPLMPSPP PPAEFFIWPH QSY*

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MAPENNWLSF SLSSMEMLQS TMNASSSVDS HNYYSFADNF YANGWANTKP QVMYTEAENH  60
PEKENNLIFT SYMDSELHQN MQPPPKLEDF FGGESTETQD SSSLTHIYDH PQTNGGGVAY  120
FNRSEQQDPK TITRFQAFSA NSGSEVDDSA FVGHTQSPVE SGSELVAYPQ AAITGSNTTT  180
HALSLGVNNN VQCTENNNVK AIVSVQSAEG CKKIADTFGQ RTSIYRGVTR HRWTGRYEAH  240
LWDNSCRREG QARKGRQDFM MIYIGGYDKE EKAARAYDLA ALKYWGPTAT TNFPISNYTK  300
ELEEMKHATK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT  360
FATEEEAAEA YDIAAIKFRG LNAVTNFEMS RYDVEAIANS SLPIGGTAKR LKLSLEAEEK  420
PPMSLPCSSS INFGAVQPVS VSTIPYGLPY DTTAPFYHHH HLFQHLQASN AGASADTSMV  480
TPMPLMPSPP PPAEFFIWPH QSY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-157	AP2 family protein