PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012216.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 1044aa MW: 116396 Da PI: 7.553

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012216.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.9	9.5e-41	151	228	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+akeyhrrhkvC+vhska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ Oeu012216.3 151 VCQVEDCRADLSNAKEYHRRHKVCDVHSKATKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 228 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1044 aa Download sequence
MESKFWGKRS IFYSPEVSDL KAAGKKSMEW DLNDWKWDGD LFTATPLHSV ADCRSGLLFP 60 VEPDIRANNN GALDGGDEMM LGNERGKREW EKRRRVIDVE NAEVNDESGS LNLNLGEQVF 120 PIKQGGEDVD KWEVKSGKKS KIAGAVTNGA VCQVEDCRAD LSNAKEYHRR HKVCDVHSKA 180 TKALVGNVMQ RFCQQCSRFH VLQEFDEGKR SCRRRLAGHN KRRRKTHPEN AANGASVNDE 240 RGSNYLLISL LRILSNIQLK VKDQGSWFPE SLTMLRKTHS DSKGKSWRCY ILLQMKAMQI 300 AVIATSSDQT KDQDLLPHLL RNLASFAGPI NERHTSGLPP TSQDMKNAGI SVATAEKDPP 360 LAVGQCMKIH ASGVRENRML TNNAQDGVLQ KESSVLLPWK GSNSTEANAS DSVVGRVKPT 420 TFDLNNVYDD SQDHVENLLD SVAPLCLYTD SHTSIATQNS GNSGSTSTHS PSTSSGEAQS 480 RTDRIVFKLF GKDPSEIPLA LRKQILDWLS HSPSDIESYI RPGCIILTIY LRMDKSTWEE 540 LYCGLSSSLR RLVDSSTDSF WSTGWIYTRV RHRVAFLYNG QIVLDTLLPL KNRRRCRISS 600 IKPIAVPVSE DVQFFVKGFN LPLSTGRLLC ALEGKYLVQE SCANVTGEAD SLIEHDEMQS 660 LRFPCIIPSS TGRGFIEVED HGLSSSFFPF IVAEKDVCSE ICTLERTIEA SEVANGIEGD 720 TDKLDARNEA LDFIHEMGWL LHKIHLKFRL GETSANMDLF PFRRFRWLVE FSVDHDWCAV 780 VRRLLGILYS GNVDAGQHKS VLLALMDIGL LHRAVRRNCR SMVELLLRYH QDEFLNKSVS 840 IHKQHDEDTY IFKPDAVGPG GLTPLHIAAS LDSCENVLDA LTEDPGSVGI EAWKGARDST 900 GLTPYDYAYF RGHFTYIHLV QRKIKTKEGS GHVVDIPGTL LDGGSIKHNV PSDAGKSAKS 960 AAVFESEKGG GRANETHCRQ CEQKLRYGRS PRSSSLAIYR PAMLSMVAIG AVCVCVALLF 1020 KSSPEVLYVF QPFRWEQLKY GSS*

Sequence ? help Back to Top

Protein Sequence Length: 1044 aa Download sequence

MESKFWGKRS IFYSPEVSDL KAAGKKSMEW DLNDWKWDGD LFTATPLHSV ADCRSGLLFP  60
VEPDIRANNN GALDGGDEMM LGNERGKREW EKRRRVIDVE NAEVNDESGS LNLNLGEQVF  120
PIKQGGEDVD KWEVKSGKKS KIAGAVTNGA VCQVEDCRAD LSNAKEYHRR HKVCDVHSKA  180
TKALVGNVMQ RFCQQCSRFH VLQEFDEGKR SCRRRLAGHN KRRRKTHPEN AANGASVNDE  240
RGSNYLLISL LRILSNIQLK VKDQGSWFPE SLTMLRKTHS DSKGKSWRCY ILLQMKAMQI  300
AVIATSSDQT KDQDLLPHLL RNLASFAGPI NERHTSGLPP TSQDMKNAGI SVATAEKDPP  360
LAVGQCMKIH ASGVRENRML TNNAQDGVLQ KESSVLLPWK GSNSTEANAS DSVVGRVKPT  420
TFDLNNVYDD SQDHVENLLD SVAPLCLYTD SHTSIATQNS GNSGSTSTHS PSTSSGEAQS  480
RTDRIVFKLF GKDPSEIPLA LRKQILDWLS HSPSDIESYI RPGCIILTIY LRMDKSTWEE  540
LYCGLSSSLR RLVDSSTDSF WSTGWIYTRV RHRVAFLYNG QIVLDTLLPL KNRRRCRISS  600
IKPIAVPVSE DVQFFVKGFN LPLSTGRLLC ALEGKYLVQE SCANVTGEAD SLIEHDEMQS  660
LRFPCIIPSS TGRGFIEVED HGLSSSFFPF IVAEKDVCSE ICTLERTIEA SEVANGIEGD  720
TDKLDARNEA LDFIHEMGWL LHKIHLKFRL GETSANMDLF PFRRFRWLVE FSVDHDWCAV  780
VRRLLGILYS GNVDAGQHKS VLLALMDIGL LHRAVRRNCR SMVELLLRYH QDEFLNKSVS  840
IHKQHDEDTY IFKPDAVGPG GLTPLHIAAS LDSCENVLDA LTEDPGSVGI EAWKGARDST  900
GLTPYDYAYF RGHFTYIHLV QRKIKTKEGS GHVVDIPGTL LDGGSIKHNV PSDAGKSAKS  960
AAVFESEKGG GRANETHCRQ CEQKLRYGRS PRSSSLAIYR PAMLSMVAIG AVCVCVALLF  1020
KSSPEVLYVF QPFRWEQLKY GSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	92	96	KRRRV
2	221	227	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein