PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012188.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 1046aa MW: 115565 Da PI: 5.0014

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012188.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.4e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Oeu012188.1 37 KGQWTPEEDEILRVAVQRFNGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	67.2	3e-21	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++d+vk++G++ W+tIa++++ gR +kqc++rw+++l Oeu012188.1 89 KGPWSKEEDEIIIDLVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	48.1	2.7e-15	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ Oeu012188.1 141 KEAWTQEEELALIHAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 183 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1046 aa Download sequence
MVSDRRSNTP SDATRDGVER VRPLHGRTSG PTRRSTKGQW TPEEDEILRV AVQRFNGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELIKG PWSKEEDEII IDLVKKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPGIN KEAWTQEEEL ALIHAHQIYG NKWAELTKFL PGRTDNAIKN 180 HWNSSVKKKL DMFSASGLLS QFQGLPLVSH PNQSTASSSS KVQRSSEDDS AVKEGVEGEE 240 VSECSQGSNV VGFSLSTNDV VHTIVRNRGD CRVPEEPDPS SSLQPCSEDY RPAFQETTFS 300 MLEVPCELGG STKFLDHDVS QDWGTLTGKD WQLNPIELPD ISLVDLAQES SGLFMQALIG 360 NNNHETVPFQ PETCMGFSAS TSMGNVVVIT DTPNPVVNSD CRMMYPEPGH DSCCPSRTVI 420 NHIDGPTDSS HHQSSNFQIP ENGTFASQSC CSMRSDMMGM SCILAPPDPT QLPPNDGSLI 480 FLMDSNQFND SSHGNAERRS LQSMQNGFVY ANESDCFPCD DGSDGMGVKE QQAEAKDVPK 540 VVPVNDFGSA LLNDIQRDPS LDKDPVETDE HRDSGVLFYE PPRFPSLDIP FFSCDLIQSG 600 ADMQQEYSPL GIRQLMISSM TPFKLWDSPS RDNSPDAVLK SAAKTFTGTP SILKKRHRDL 660 VSPLSEKRDE KKLESDLKQE SFSNLTSDFS RLGVMIDERV DQKGSIMVLS PEDKRNCKAS 720 CVEKENMNPT FAKGKQEGNG HMEISECKMI EKQFNSSEAL NAVTGVNNKA GGNDAVETAN 780 ELNGIFVERD MNDLLFFSPD RFGIKSDTAI GLSAKAFGNK LSRRLDSASK HVAILSSSEI 840 PGLSVVCSPR MCAKKDVSKL ATTSSLPSSS LENKDENSSK GVHIENKSIF EGTPFKINIE 900 SPSAWRSPWF VNSFLPGPRV DTDITIEDIG YFMSPGDQGY DAIGLMKQLG EQTASAFADA 960 QEILGDETPE TIMKGKCIKN WEADKENIGS PNCQTAHRSL STSNVLTERR TLDFSECGTP 1020 QKETENFSSS ISSSSPSSYL LKSCR*

Sequence ? help Back to Top

Protein Sequence Length: 1046 aa Download sequence

MVSDRRSNTP SDATRDGVER VRPLHGRTSG PTRRSTKGQW TPEEDEILRV AVQRFNGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELIKG PWSKEEDEII IDLVKKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPGIN KEAWTQEEEL ALIHAHQIYG NKWAELTKFL PGRTDNAIKN  180
HWNSSVKKKL DMFSASGLLS QFQGLPLVSH PNQSTASSSS KVQRSSEDDS AVKEGVEGEE  240
VSECSQGSNV VGFSLSTNDV VHTIVRNRGD CRVPEEPDPS SSLQPCSEDY RPAFQETTFS  300
MLEVPCELGG STKFLDHDVS QDWGTLTGKD WQLNPIELPD ISLVDLAQES SGLFMQALIG  360
NNNHETVPFQ PETCMGFSAS TSMGNVVVIT DTPNPVVNSD CRMMYPEPGH DSCCPSRTVI  420
NHIDGPTDSS HHQSSNFQIP ENGTFASQSC CSMRSDMMGM SCILAPPDPT QLPPNDGSLI  480
FLMDSNQFND SSHGNAERRS LQSMQNGFVY ANESDCFPCD DGSDGMGVKE QQAEAKDVPK  540
VVPVNDFGSA LLNDIQRDPS LDKDPVETDE HRDSGVLFYE PPRFPSLDIP FFSCDLIQSG  600
ADMQQEYSPL GIRQLMISSM TPFKLWDSPS RDNSPDAVLK SAAKTFTGTP SILKKRHRDL  660
VSPLSEKRDE KKLESDLKQE SFSNLTSDFS RLGVMIDERV DQKGSIMVLS PEDKRNCKAS  720
CVEKENMNPT FAKGKQEGNG HMEISECKMI EKQFNSSEAL NAVTGVNNKA GGNDAVETAN  780
ELNGIFVERD MNDLLFFSPD RFGIKSDTAI GLSAKAFGNK LSRRLDSASK HVAILSSSEI  840
PGLSVVCSPR MCAKKDVSKL ATTSSLPSSS LENKDENSSK GVHIENKSIF EGTPFKINIE  900
SPSAWRSPWF VNSFLPGPRV DTDITIEDIG YFMSPGDQGY DAIGLMKQLG EQTASAFADA  960
QEILGDETPE TIMKGKCIKN WEADKENIGS PNCQTAHRSL STSNVLTERR TLDFSECGTP  1020
QKETENFSSS ISSSSPSSYL LKSCR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein