PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu011876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 28102.9 Da PI: 7.6133 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23 | 1.9e-07 | 16 | 47 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg W++eEde+l + +G g+W++++r g Oeu011876.1 16 RGLWSPEEDEKLTRHKSAYGHGCWSAVPRLAG 47 788**************************987 PP | |||||||
2 | Myb_DNA-binding | 24.7 | 5.4e-08 | 82 | 104 | 22 | 45 |
T-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwq 45 + W+ Ia++++ gRt+ ++k++w+ Oeu011876.1 82 RKWAQIAKHLP-GRTDDEVKNFWN 104 47*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MSPGQHTCCD KQKVKRGLWS PEEDEKLTRH KSAYGHGCWS AVPRLAGITF GNFNFRTHVV 60 AEMRQELQAK MDELLEAGSE KRKWAQIAKH LPGRTDDEVK NFWNSSIKKK LMATNLSHST 120 RSNFQGLSSI NFNSSLIPTA QMDQVYIPPA APNNPAPQGF GQEDTSMFIN GGPAAQQFFN 180 APPLMRNYVD TSVINGLPKV YEMTNGNQFG MHSSVPPVPE PVSESFSGFP SGLYVPEMQV 240 PAVCHIQFIE SLM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13890.2 | 1e-38 | MYB family protein |