PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu011871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 326aa MW: 36130.9 Da PI: 7.603 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 7.6e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv+ + G g+W+ ++r g+ R++k+c++rw +yl Oeu011871.1 16 RGLWSPEEDEKLVRHISANGHGCWSVVPRLAGLQRCGKSCRLRWINYL 63 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E l++d+++ lG++ W+ Ia++++ gRt++++k++w++ Oeu011871.1 69 RGSFSAQEAALIIDLHNILGNK-WAQIAKHLP-GRTDNEVKNFWNS 112 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MGHGHHTCCN KQKVKRGLWS PEEDEKLVRH ISANGHGCWS VVPRLAGLQR CGKSCRLRWI 60 NYLRPDLKRG SFSAQEAALI IDLHNILGNK WAQIAKHLPG RTDNEVKNFW NSNIKKKLMS 120 RNLSNMAPVS DLPAISNMTN SRSNFHGLYS MNSNSNLIPT AQMDQVYIPA AAPNNPLPQG 180 FDQVNFNTNL HPSFPMSSLD SSAYDLLPMP LWISSEYQKP QLIDHHQQQF IKQEDTSMYI 240 TGGAAASEFI NPPPLMGTYE DTSVNNGLPK LCEIINGNQY GMSSSSTSQD FEPVSGAGFS 300 GFPSDLYAPE MQVPLVIYSQ YGGMI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 3e-74 | MYB family protein |