PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu011362.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 369aa MW: 40484.9 Da PI: 7.1882 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 129.1 | 1.9e-40 | 173 | 272 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r da++slv+eA++r+rdPvyG++g i++lqqq+++l+ael+++k Oeu011362.1 173 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEAQRVDAANSLVFEANVRLRDPVYGSMGAISALQQQVQTLQAELSAVK 270 7***********************************************************************************************99 PP DUF260 99 ee 100 +e Oeu011362.1 271 AE 272 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MTMKQIGHSH LPFRQSNVTG EHSCMVLKPL NNDDIETSGS DPMGFIRPFY QGWFQAYFHS 60 TTVDYLPTNG IQACDEYFGS QAKLLGSGGP YLVLFQWFFN FRPPSYDATG SICTPGLVSR 120 LNETSRFTFY AWISRIREGF DEIGKNFMTE EIDAMMGRRH MLGPPGSLNT VTPCAACKLL 180 RRRCAEECPF SPYFSPHEPQ KFAAVHKVFG ASNVSKMLME VPEAQRVDAA NSLVFEANVR 240 LRDPVYGSMG AISALQQQVQ TLQAELSAVK AEILRYKYRE AANTIIVSTN AAALFSSETV 300 SVSVAELPQA PPPPTAYRPA APPTPSPPPP AAPPAADVSS SSSAPSLYTS FRSMSFNNIS 360 NNNVSYFH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 5e-76 | LBD family protein |