PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011362.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 369aa    MW: 40484.9 Da    PI: 7.1882
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011362.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.11.9e-401732721100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+Ca++C+++pyf  ++p+kfa+vhk+FGasnv+k+l ++pe +r da++slv+eA++r+rdPvyG++g i++lqqq+++l+ael+++k
  Oeu011362.1 173 PCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEAQRVDAANSLVFEANVRLRDPVYGSMGAISALQQQVQTLQAELSAVK 270
                  7***********************************************************************************************99 PP

       DUF260  99 ee 100
                  +e
  Oeu011362.1 271 AE 272
                  87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MTMKQIGHSH LPFRQSNVTG EHSCMVLKPL NNDDIETSGS DPMGFIRPFY QGWFQAYFHS  60
TTVDYLPTNG IQACDEYFGS QAKLLGSGGP YLVLFQWFFN FRPPSYDATG SICTPGLVSR  120
LNETSRFTFY AWISRIREGF DEIGKNFMTE EIDAMMGRRH MLGPPGSLNT VTPCAACKLL  180
RRRCAEECPF SPYFSPHEPQ KFAAVHKVFG ASNVSKMLME VPEAQRVDAA NSLVFEANVR  240
LRDPVYGSMG AISALQQQVQ TLQAELSAVK AEILRYKYRE AANTIIVSTN AAALFSSETV  300
SVSVAELPQA PPPPTAYRPA APPTPSPPPP AAPPAADVSS SSSAPSLYTS FRSMSFNNIS  360
NNNVSYFH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.15e-76LBD family protein