PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011111.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 157aa    MW: 17556.2 Da    PI: 6.7205
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011111.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.76.1e-4112110199
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+l+r+C++ C +apyf +++++kfa vhk+FGasnv+k+l+++p+e+reda++slvyeA++r++dPvyG++gvi +lq+++ +l+++l l +
  Oeu011111.1  12 SCAACKLLKRRCTPTCQFAPYFQSDESNKFAKVHKVFGASNVSKILNEVPQEQREDAVNSLVYEADVRLSDPVYGCIGVIASLQKKIVELQHDLILSR 109
                  6******************************************************************************************9998776 PP

       DUF260  99 e 99 
                  +
  Oeu011111.1 110 A 110
                  5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MKSHRELCSG SSCAACKLLK RRCTPTCQFA PYFQSDESNK FAKVHKVFGA SNVSKILNEV  60
PQEQREDAVN SLVYEADVRL SDPVYGCIGV IASLQKKIVE LQHDLILSRA RLAYYVDQTV  120
LCLDDGANMC PVIDMVEPFK GKDCFSFDQF TQYPFP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.12e-58LBD family protein