PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu011060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YC | ||||||||
Protein Properties | Length: 110aa MW: 11957.9 Da PI: 9.7332 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 103.3 | 1.6e-32 | 22 | 102 | 19 | 98 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h lPlarikki+k + +dvkmi+ eaP+++skacelfi e+t r+w+ + + krrtl k d+a+av tdifdflv+ v Oeu011060.1 22 HLLPLARIKKIMKkSSDDVKMITGEAPIVFSKACELFIEEITKRAWNITLQGKRRTLCKEDVASAVITTDIFDFLVNLVSD 102 789*********825689**********************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
MKRPGTYSGI LSGGISGRTG PHLLPLARIK KIMKKSSDDV KMITGEAPIV FSKACELFIE 60 EITKRAWNIT LQGKRRTLCK EDVASAVITT DIFDFLVNLV SDSAKSEES* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 6e-33 | NF-YC family protein |