PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010995.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 288aa    MW: 33549.8 Da    PI: 9.0085
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010995.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.26.9e-09168189426
                  ---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                   +C+ f++ G+C++G++C FaHg
  Oeu010995.1 168 TICSEFRK-GHCSRGESCEFAHG 189
                  58******.*************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MYIRHLSSST PNSLYPTLPY PTPHHHSVSI LDFRMGISAC TEFQRQQKFH QSHQLNAQKK  60
MLREIQIPPR KLHRRHLAAA QTLYHNGGGA TYIFMDSADQ SFLSKKRLPY NDDDDEKNPF  120
TSDYFRMYEF KVRMCPQGGS HDWSSCPYAH PGEKARRRDP QKYRYTGTIC SEFRKGHCSR  180
GESCEFAHGI FESWLHPTRY RTEACKDGRY CCRRVCFFAH TPSQIRLLPE EYSSPMNSPV  240
TNVNHRCSCC RHSNNTILAS HNSTLMGVSP EKERDFPLFP RYNDSFY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-59C3H family protein