PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010957.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 789aa MW: 88288 Da PI: 6.6747

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010957.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	116.4	1.5e-36	140	216	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv++Cead+s++k yh+rh+vC ++++a+vv+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr++ Oeu010957.1 140 RCQVPECEADISKLKGYHKRHRVCLQCANASVVVLDGESKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRRP 216 6************************************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MQQKHTETPS DLLQILEFPS TDDGNITGDP TSASLFDWSN FLDFDLDDNL NLAFDPQAIH 60 GPESESGPGV DPIQPQSQQP KNSTRVRKRD PRLVCSNFLA GRIPCACPEL DAKLEEEESG 120 DQSGKKRVRT VRVPVGATAR CQVPECEADI SKLKGYHKRH RVCLQCANAS VVVLDGESKR 180 YCQQCGKFHI LSDFDEGKRS CRRKLERHNN RRRRRPNDSK GSTEKESLQV VLVDDVSCNA 240 DKGKDSICLS SQIAEPEILL ESEGHMSTIN SGLGSQTIQR DTFLAFAASG ETHLDGEKEK 300 PKQKYSPSYC ENNSSFSSLC PAVRISFKLY DWNPAEFPRR LRHQIFEWLA SMPVELEGYI 360 RPGCTILTAF IAVPKVMWLK LLEEPAKCIQ ELLASPGNML SGRMHVYLYN KIFRVTKDDC 420 VVEVKVNEQA PKLHYVYPTC FEAGKPLEFV ACGTNLLQPK FRFLVSFGGQ YLAYNICVSS 480 IGCKKEGDTN SVDHQLLKIY VPPTDLYLFG PAFIEVENLS GLSNFIPILI GNKEVCVEME 540 LLQKNFNTSL GSEEQQFSLR SACEILATRQ AEFSRFLLEV AWSLKKPISE QPLTSTQVQR 600 FNYLLNFLIE RESAVILERI LHCMKSKMDN NFVVGISDAD MKLLRVNMDN VRNVLHQTLE 660 EKKYSVRHAL DGNFFSQISQ HDSPPVPATN QGLKWAKNNL ESRVALPSLG ESATVPLLNG 720 ELLMSVNLEE RPGKSCSRLF TMTVVISHPL VFAIAAVGVC FGICAVVLHP QKVSELATTI 780 ARCLFDDS*

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MQQKHTETPS DLLQILEFPS TDDGNITGDP TSASLFDWSN FLDFDLDDNL NLAFDPQAIH  60
GPESESGPGV DPIQPQSQQP KNSTRVRKRD PRLVCSNFLA GRIPCACPEL DAKLEEEESG  120
DQSGKKRVRT VRVPVGATAR CQVPECEADI SKLKGYHKRH RVCLQCANAS VVVLDGESKR  180
YCQQCGKFHI LSDFDEGKRS CRRKLERHNN RRRRRPNDSK GSTEKESLQV VLVDDVSCNA  240
DKGKDSICLS SQIAEPEILL ESEGHMSTIN SGLGSQTIQR DTFLAFAASG ETHLDGEKEK  300
PKQKYSPSYC ENNSSFSSLC PAVRISFKLY DWNPAEFPRR LRHQIFEWLA SMPVELEGYI  360
RPGCTILTAF IAVPKVMWLK LLEEPAKCIQ ELLASPGNML SGRMHVYLYN KIFRVTKDDC  420
VVEVKVNEQA PKLHYVYPTC FEAGKPLEFV ACGTNLLQPK FRFLVSFGGQ YLAYNICVSS  480
IGCKKEGDTN SVDHQLLKIY VPPTDLYLFG PAFIEVENLS GLSNFIPILI GNKEVCVEME  540
LLQKNFNTSL GSEEQQFSLR SACEILATRQ AEFSRFLLEV AWSLKKPISE QPLTSTQVQR  600
FNYLLNFLIE RESAVILERI LHCMKSKMDN NFVVGISDAD MKLLRVNMDN VRNVLHQTLE  660
EKKYSVRHAL DGNFFSQISQ HDSPPVPATN QGLKWAKNNL ESRVALPSLG ESATVPLLNG  720
ELLMSVNLEE RPGKSCSRLF TMTVVISHPL VFAIAAVGVC FGICAVVLHP QKVSELATTI  780
ARCLFDDS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	214	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein