PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010550.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 186aa    MW: 21251.4 Da    PI: 10.2152
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010550.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.21.9e-121049241
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                  i n+  r  +f kR++gi+ K +EL++LCd++  +ii s
  Oeu010550.1 10 YIANDAGRRASFKKRKKGIMNKMNELCTLCDIRGRIIINS 49
                 589999***************************9999977 PP

Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MTRGKIKLEY IANDAGRRAS FKKRKKGIMN KMNELCTLCD IRGRIIINSA YEPQPTVWPS  60
PLDAQQIISR FRELPEMDQT QRLFNQESYT IQRVQKSHKL AEKLQRINRL TDMEILMHQR  120
MAGLSSLQNS PLNDITEMGR LAEQNMLDIV ARMEELEKNR ATTLQMGGTS SSPPRDDAAG  180
PSFRN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.17e-31M-type_MADS family protein