PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010550.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 186aa MW: 21251.4 Da PI: 10.2152 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 38.2 | 1.9e-12 | 10 | 49 | 2 | 41 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 i n+ r +f kR++gi+ K +EL++LCd++ +ii s Oeu010550.1 10 YIANDAGRRASFKKRKKGIMNKMNELCTLCDIRGRIIINS 49 589999***************************9999977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MTRGKIKLEY IANDAGRRAS FKKRKKGIMN KMNELCTLCD IRGRIIINSA YEPQPTVWPS 60 PLDAQQIISR FRELPEMDQT QRLFNQESYT IQRVQKSHKL AEKLQRINRL TDMEILMHQR 120 MAGLSSLQNS PLNDITEMGR LAEQNMLDIV ARMEELEKNR ATTLQMGGTS SSPPRDDAAG 180 PSFRN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 22 | 26 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48670.1 | 7e-31 | M-type_MADS family protein |