PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu010428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 230aa MW: 25484.7 Da PI: 7.8815 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.8 | 1.9e-05 | 128 | 150 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++F++ L H+r+H Oeu010428.1 128 HKCHVCNQTFTTGQALGGHMRRH 150 79********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MAGLQTNEFD TLCSQSSKKR NHEPTEIEEE AALALLMLSQ DNRSWHTIPA TSAAAVVELI 60 KDVLNLATTA VTTTSERTAA LASSDDDKKS MEPFLLLLSL LRRTRICLRH HCTSTSNISY 120 LNPSGRIHKC HVCNQTFTTG QALGGHMRRH YEGEIKGGKK TSGITSRGGA FSQCNSNGRT 180 ITVDFNLNQP ALLETYSDFT LYIRQNFQVL GDQHKVESQI PFQKQRLDE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G37430.1 | 5e-11 | C2H2 family protein |