PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010355.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 286aa    MW: 31289.6 Da    PI: 9.3324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010355.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.3e-12214259655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el P+     +k  s a++L +Av+YIk+Lq
  Oeu010355.1 214 SIAERMRRTRISERMKKLQELFPNM----DKQTSIADMLDLAVDYIKDLQ 259
                  689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MYQSGGSIVG SYSVGMENQV GLRMNNGIGN CSNLVRQSSS PAGFFSGYGV TGEAGNYRVS  60
NGTGAEANSS ANGLNNYMNF SSGAPSRSRF MPSIPENGNE GTSLTNLENG QWRNGNSANS  120
KEYDAAFPKD TWNDSSFNRL KRNRDGDSKM FSNFSGSENQ SVETRSNNQG LAHHLSLPKT  180
SAEMAAVENY LQFQQDTIPL QVRAKRGCAT HPRSIAERMR RTRISERMKK LQELFPNMDK  240
QTSIADMLDL AVDYIKDLQK QVETLTDKKT KCTCSSKPNQ ANAVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-58bHLH family protein