PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | SBP | ||||||||
Protein Properties | Length: 122aa MW: 12603.3 Da PI: 10.1536 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 55.4 | 1.6e-17 | 79 | 121 | 1 | 43 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfC 43 +CqvegCeadls ak ++rhk+C +hsk+p+v+v+gleqrfC Oeu010189.1 79 RCQVEGCEADLSGAKANYSRHKMCGTHSKSPKVIVAGLEQRFC 121 6****************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MELGSASASS SSSSTSGGSE SLNGFKFGKK IYFEDVGVGV QDKFGGGPPS LPPKATGLPP 60 PSPAKKRRRS MVQSGQPPRC QVEGCEADLS GAKANYSRHK MCGTHSKSPK VIVAGLEQRF 120 C* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 2e-19 | SBP family protein |