PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010170.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 657aa MW: 72156.2 Da PI: 4.9964

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010170.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.8	7.4e-15	330	381	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu010170.1 330 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 381 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MDSMNNWLGF SLSPQQVLSS QPSQNLGLNS DEISAGTEEV PGECFDLTSD STIPSLNLTA 60 PFGILEAFNG NNQSQDWNLK EMSTNSFSCS SQNLENQIPR LENFLGGHSY NDQEHKKYQS 120 STCNNITASS YIYQESEPTS HPTSNRSGIG MNDNSTIGLS MIKNWLRNNP ALPQPEENTA 180 KNEAEPPPCT ASAQILSLSM STGSQSDSPL PFLNGNAGES STIDGKQHSG NALDSQTGAI 240 DSVPRKSIDT FGQRTSIYRG VTRPTFISSF YISDNLDVLE YENSITEYIL CYSSTISNYE 300 KELEEMKHMT RQEYVASLRR KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 360 TFSTQEEAAE AYDIAAIKFR GLNAVTNFEI SRYDVKSILE SSTLPIGGAA KRLKDAENAE 420 LALDIQRSAS NGNPISHLTD GLNGYNNGWP NAMAFHQPQP LSMHYPYPQQ RYLWCKQEHD 480 LEVNRNIHDL HQLHSGNMQN FLQPSVLHNL MSLDSSSMEH NSGSNSLVYN NGAGGDGYRH 540 SASYQLSDAN GSNGNFAVPM GMVLVQEGLN QNQTNGFGEN EVKPLMFGSG DPYQTRNLIS 600 YEPQQPSDGM EKASVYDQAS ANCNNWMPAA VPNLAARPNN VAVCHGGSTF TVWNDT*

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MDSMNNWLGF SLSPQQVLSS QPSQNLGLNS DEISAGTEEV PGECFDLTSD STIPSLNLTA  60
PFGILEAFNG NNQSQDWNLK EMSTNSFSCS SQNLENQIPR LENFLGGHSY NDQEHKKYQS  120
STCNNITASS YIYQESEPTS HPTSNRSGIG MNDNSTIGLS MIKNWLRNNP ALPQPEENTA  180
KNEAEPPPCT ASAQILSLSM STGSQSDSPL PFLNGNAGES STIDGKQHSG NALDSQTGAI  240
DSVPRKSIDT FGQRTSIYRG VTRPTFISSF YISDNLDVLE YENSITEYIL CYSSTISNYE  300
KELEEMKHMT RQEYVASLRR KSSGFSRGAS IYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  360
TFSTQEEAAE AYDIAAIKFR GLNAVTNFEI SRYDVKSILE SSTLPIGGAA KRLKDAENAE  420
LALDIQRSAS NGNPISHLTD GLNGYNNGWP NAMAFHQPQP LSMHYPYPQQ RYLWCKQEHD  480
LEVNRNIHDL HQLHSGNMQN FLQPSVLHNL MSLDSSSMEH NSGSNSLVYN NGAGGDGYRH  540
SASYQLSDAN GSNGNFAVPM GMVLVQEGLN QNQTNGFGEN EVKPLMFGSG DPYQTRNLIS  600
YEPQQPSDGM EKASVYDQAS ANCNNWMPAA VPNLAARPNN VAVCHGGSTF TVWNDT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-87	AP2 family protein