PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009996.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 301aa    MW: 34077.5 Da    PI: 9.8425
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009996.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.56.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEd ll ++++q+G g+W++++++ g+ R++k+c++rw +yl
      Oeu009996.1 14 KGPWSSEEDTLLRNYIQQHGEGQWRSVPNKAGLLRCGKSCRLRWMNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.65e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ Tt+E++l+++++ +lG++ W++Ia +++ gRt++++k++w++++
      Oeu009996.1  67 RGNITTDEEDLIIRLHSLLGNR-WTLIAGRLP-GRTDNEVKNHWNTHM 112
                      7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MGRSPCCSKV GLQKGPWSSE EDTLLRNYIQ QHGEGQWRSV PNKAGLLRCG KSCRLRWMNY  60
LRPGIKRGNI TTDEEDLIIR LHSLLGNRWT LIAGRLPGRT DNEVKNHWNT HMLKKLKNSG  120
IQPKIPKHST KLPGQETQNA VEPETDKRST KCPEAETQNA VEPEADKRSK KSLQKQTKST  180
VPETGISRRR TKKERNGTQG SETRTLHIPK PIRLSSVCSR SNSLDSLLSA ASSGDVSVDT  240
EKFKLWPLVE PDHANHGGFD KVFDEYKDFF STYEFPLHYS DSSSSVKMLE KVYDEYLQLL  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.15e-64MYB family protein