PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009847.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 327aa MW: 37044.6 Da PI: 7.1239

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009847.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + + ++g++R++k+c++rw++yl Oeu009847.1 14 KGPWSPEEDAKLKVYIEKYGTGgNWIALPPKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39	1.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd + + G++ W+ Ia+ ++ gRt++++k++w++ Oeu009847.1 69 GGFTEEEDNTICSLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKVYIE KYGTGGNWIA LPPKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNTIC SLYISIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLGK 120 RKQSTHTNRL SIADDQSPKG VDDNAYLQNL SSSALERLQL HMQLQGLQNP FSFYSNPALW 180 PKLNPQKMIQ NLQYSLNENQ NILMPQAPHS PNPTAVTLQE EYCNMNNFKV AQQLNTITDT 240 DIDTGFKTGS TYTHSELDDF LSKEAANLQP TESQIAELDC FRNVEWWSNE FDHSSRSGDS 300 TSFLHQSEEM CQEYGQGPLG YNLQNL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-96	MYB family protein