PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009819.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 461aa MW: 51375.9 Da PI: 6.252

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009819.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.7e-17	146	195	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Oeu009819.2 146 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 195 78*****************......55**********************997 PP
2	AP2	27.8	6.2e-09	238	277	1	44
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAak 44 s+y+GV+ ++ grW+A+ g +k+++lg f+t+ eAa+ Oeu009819.2 238 SKYRGVTLHR-CGRWEAR---L---GqllGKKYVYLGLFDTEVEAAR 277 89****99.7**...5...334336********889997 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MWNLNYSPDQ RMDEGGKGER VGSEWNSMED GFSEEEDAER SGGDGNKKKS SKIFGFSVSR 60 DCDDDDIGPC SLGSEPPVTR QFFPVDESET TVTSGGGVAP NFPRSHWMGV KFCLSDATTV 120 GVLGKSAAEV SQPLKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH 180 AAARAYDRAA IKFRGVEADI NFSLDDYEED FKQTSNLTKE EFVHVLRRRS TGFPRGSSKY 240 RGVTLHRCGR WEARLGQLLG KKYVYLGLFD TEVEAARYVY LGLFDTEVEA ARAYDKAAIK 300 CNGKEAVTNF DPSIYEEELG DADSSSNAFD HNLDLSLGNS ASKSIGREFG DDIHHTRDQH 360 SSSMQFEAEW RCQGLIPEHQ TQLCSTGSVK FTEMHRYGPF VKAKEPRMLP IFRAAATVAG 420 FEADEGELPL STKDHQSQTN CPRFLAASSG FQQLRISCRN *

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MWNLNYSPDQ RMDEGGKGER VGSEWNSMED GFSEEEDAER SGGDGNKKKS SKIFGFSVSR  60
DCDDDDIGPC SLGSEPPVTR QFFPVDESET TVTSGGGVAP NFPRSHWMGV KFCLSDATTV  120
GVLGKSAAEV SQPLKKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH  180
AAARAYDRAA IKFRGVEADI NFSLDDYEED FKQTSNLTKE EFVHVLRRRS TGFPRGSSKY  240
RGVTLHRCGR WEARLGQLLG KKYVYLGLFD TEVEAARYVY LGLFDTEVEA ARAYDKAAIK  300
CNGKEAVTNF DPSIYEEELG DADSSSNAFD HNLDLSLGNS ASKSIGREFG DDIHHTRDQH  360
SSSMQFEAEW RCQGLIPEHQ TQLCSTGSVK FTEMHRYGPF VKAKEPRMLP IFRAAATVAG  420
FEADEGELPL STKDHQSQTN CPRFLAASSG FQQLRISCRN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-120	AP2 family protein