PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009776.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 432aa MW: 49938.8 Da PI: 8.0396

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009776.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.1e-05	160	183	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg+ ++++ +Lk+H r H Oeu009776.1 160 YICSVCGRKCKTNFDLKKHFRQlH 183 89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MILNSLFNSI EPLPPKICPS PPKLKPSSLR PPFVINPIIL FSSKSSLYNV KCCQWTPIKA 60 CKAEREIDMV KTKEGIYTAK PKKVVVLWDL DNKPPRGPPY QAALALKGVA QKFGEVTDIS 120 AYANHHAFIH LPQWVLEERR ERRQMDFLER KGLSTPTEPY ICSVCGRKCK TNFDLKKHFR 180 QLHERERQKK LNRMRSLKGK KRQRYKERFI NGNEKYNETA RRLLTPKVGY GLAQELRRAG 240 VYVKTVEDKP QAADWALKRQ MQHSMSRSVN WMVLVSDDSD FSEMLRKARE ANLGTVVVGD 300 QDRSLGRHAD IWVPWIRVEN GEIKENDLEL KSKIRREFDG RRGRSFSVSE FDGGLAEENL 360 DELVGRMELD DVRISSFSEV EEGYEEDDDW IGARLDKQDN VNSIIYDDGK EGDYLLYSED 420 EELEEADDAY F*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MILNSLFNSI EPLPPKICPS PPKLKPSSLR PPFVINPIIL FSSKSSLYNV KCCQWTPIKA  60
CKAEREIDMV KTKEGIYTAK PKKVVVLWDL DNKPPRGPPY QAALALKGVA QKFGEVTDIS  120
AYANHHAFIH LPQWVLEERR ERRQMDFLER KGLSTPTEPY ICSVCGRKCK TNFDLKKHFR  180
QLHERERQKK LNRMRSLKGK KRQRYKERFI NGNEKYNETA RRLLTPKVGY GLAQELRRAG  240
VYVKTVEDKP QAADWALKRQ MQHSMSRSVN WMVLVSDDSD FSEMLRKARE ANLGTVVVGD  300
QDRSLGRHAD IWVPWIRVEN GEIKENDLEL KSKIRREFDG RRGRSFSVSE FDGGLAEENL  360
DELVGRMELD DVRISSFSEV EEGYEEDDDW IGARLDKQDN VNSIIYDDGK EGDYLLYSED  420
EELEEADDAY F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52010.1	1e-157	C2H2 family protein