PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu009082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 209aa MW: 22123.6 Da PI: 8.7661 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.1 | 1.6e-39 | 37 | 138 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll+++p ++r+da+ ++ yeA+ar++dPvyG+v++i +lqqq+ +l++el+++ Oeu009082.1 37 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLSHIPANRRHDAVVTISYEAQARLSDPVYGCVSTIIALQQQVTSLQEELSVV 134 7***********************9989*********************************************************************9 PP DUF260 98 keel 101 +++l Oeu009082.1 135 QTQL 138 9885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
MDGSQGDGTS DNRRKGSGKR SAGQAETAAG ALALNAPCGA CKFLRRKCIS GCIFAPHFGS 60 DQGAARFAAV HKVFGASNVS KLLSHIPANR RHDAVVTISY EAQARLSDPV YGCVSTIIAL 120 QQQVTSLQEE LSVVQTQLMN SRFAMVNALQ NSSSQQQQQQ HVAVLQPAYS NTSSASNNNL 180 ISINNFSSAS NFEQTAAPSN NFEPFQAQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G03760.1 | 2e-69 | LBD family protein |