PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu009054.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 231aa MW: 25011.5 Da PI: 9.1412 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 80.9 | 1.1e-25 | 131 | 193 | 1 | 68 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneir 68 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+ Oeu009054.1 131 RYDNSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQ 193 689*******************************...99..************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MNKQLSFTSM KPPFGGGGDS DYRHFSSSAA TDYGRPLPSQ EPDEVIVAKT PPPLKRKNGM 60 GDCEVGFTEQ NLGPGCVGLI NSALQTPVSG KTGMAQKVRR TAKANKARLQ TPVANIGSSP 120 GNILIPLGPC RYDNSLGLLT KKFINLIKHA EDGILDLNKA ADTLEVQKRR IYDITNVLEG 180 IGLIEKKLKN RIQGADVSRP GEVDVSLNSL QAEVENLNME EHKFDERIRS * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22220.3 | 4e-65 | E2F/DP family protein |