PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009007.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 636aa MW: 70514.8 Da PI: 9.7748

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009007.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.6	2.4e-12	517	562	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W eEd +l+ +v+q+G + W+ a++m gR +kqc++rw+++l Oeu009007.1 517 NQWIGEEDRRLISLVHQFGLRKWAVTAEEMV-GRVGKQCRERWNNHL 562 56777************************.***********97 PP
2	Myb_DNA-binding	41	4.4e-13	574	610	7	45
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +E+ +l++a+++lG++ W Ia++++ gRt+ ++k++w+ Oeu009007.1 574 DEERRLIQAHERLGNR-WLEIAKYIP-GRTEISIKNHWN 610 8*************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 636 aa Download sequence
MPTSDHNLDM GPPPMNSEGP KTLGVVSSMS NFAGIEALEK VQPGTDFEIN SRTMVQQGHA 60 LDIQNAHEIV NLRLKNHGNR RSDAPVTAPN VNGQFVEKLR FSASTVLTSG NASDRIIQRE 120 IPHKTVENHK ILPPVDFGRK TEPLAAGRWR SGGPLATFDQ NVLIVNLNPF SSSVFPHEAQ 180 TVLNQGQKTY ATAVSGRPGL SQVPTSTRIT VDPEVPPYIH SVAEPTPNAP IEVPTSPIIT 240 SIAPIPTANT DLAPEPTHMS SPPLKTHTDG TQSAQGSGTG TVPQTTLAQG LLAEISSERH 300 GVKHMLIDHF KKDHGMKVGY TMRFAIEDLV FKLFGEGPSV SKTPAHTPSP SPYITAPIHN 360 KVKEHIQRDM DGMGLGNCMQ NAEDDVPTAS RSISHDSDVV AQNTMRLDAP TTSTMRSDAP 420 AFRPIFSAPP SEQYLSPKQA PKCRRDPSPT SEPDIADYYD PKMFQTRRMT RSMSIYLLQF 480 TFAGGENLLV NVIPAPVNPD RKEKREDSSS SGYQIKNQWI GEEDRRLISL VHQFGLRKWA 540 VTAEEMVGRV GKQCRERWNN HLRSHIKKDV LIDDEERRLI QAHERLGNRW LEIAKYIPGR 600 TEISIKNHWN ATKRRQISRR KMKKVKGDRR QSTLL*

Sequence ? help Back to Top

Protein Sequence Length: 636 aa Download sequence

MPTSDHNLDM GPPPMNSEGP KTLGVVSSMS NFAGIEALEK VQPGTDFEIN SRTMVQQGHA  60
LDIQNAHEIV NLRLKNHGNR RSDAPVTAPN VNGQFVEKLR FSASTVLTSG NASDRIIQRE  120
IPHKTVENHK ILPPVDFGRK TEPLAAGRWR SGGPLATFDQ NVLIVNLNPF SSSVFPHEAQ  180
TVLNQGQKTY ATAVSGRPGL SQVPTSTRIT VDPEVPPYIH SVAEPTPNAP IEVPTSPIIT  240
SIAPIPTANT DLAPEPTHMS SPPLKTHTDG TQSAQGSGTG TVPQTTLAQG LLAEISSERH  300
GVKHMLIDHF KKDHGMKVGY TMRFAIEDLV FKLFGEGPSV SKTPAHTPSP SPYITAPIHN  360
KVKEHIQRDM DGMGLGNCMQ NAEDDVPTAS RSISHDSDVV AQNTMRLDAP TTSTMRSDAP  420
AFRPIFSAPP SEQYLSPKQA PKCRRDPSPT SEPDIADYYD PKMFQTRRMT RSMSIYLLQF  480
TFAGGENLLV NVIPAPVNPD RKEKREDSSS SGYQIKNQWI GEEDRRLISL VHQFGLRKWA  540
VTAEEMVGRV GKQCRERWNN HLRSHIKKDV LIDDEERRLI QAHERLGNRW LEIAKYIPGR  600
TEISIKNHWN ATKRRQISRR KMKKVKGDRR QSTLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-44	MYB family protein