PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 548aa MW: 59836.5 Da PI: 5.8884 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l Oeu008544.1 34 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 81 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 52.8 | 9.1e-17 | 87 | 130 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l++++++++G++ W++ a++++ gRt++++k++w++ Oeu008544.1 87 KGAFTPEEERLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 130 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 548 aa Download sequence |
MSCSISNELS ADSALFDEGG SYGGSSNVGV VQKKGPWTSA EDAILVDYVK KHGEGNWNAV 60 QKHSGLSRCG KSCRLRWANH LRPNLKKGAF TPEEERLIIE LHAKMGNKWA RMAAHLPGRT 120 DNEIKNYWNT RIKRHQRVGL PLYPSDFCLQ AIRENQQNLN APGIPGGDTG CQNLLQSNGC 180 QTPDVMFDSL NTNQGVLPYG TEFLDGSASS LLMKGFNSQF SHFIPSMTRR QKRTREPDEF 240 ISWYSNSTSD DNPPFDRDQN DVYQNNTAQL VVPCCTYDPD PVTKKLLSFG VNHSHSILNG 300 HFSASKPTAG AMKIELPSLQ HQETSLGQWR SPPLPPVLEL VDSFIMSPQS VPLPLPPGCP 360 SPRSSGLLEA LVYEANSRGN SRNQSSEKST SSSKISCNNI TDSSALKTSS TEFGGYHDPK 420 SSLGNSSGSV LSECTPTSAT GSSLEENVPG IEQSWILDGE RRENLNQLHF SRPDALLGSC 480 WIEQSAFCSK EHGTVMDDIT SLLGDDLGTE VKDTNPGTSG LSSEWSLTWN NMPAVYQISE 540 PSMNNAL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.3 | 8e-97 | MYB family protein |