PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu008284.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 788aa MW: 87853.4 Da PI: 4.8422

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu008284.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38	3.7e-12	28	66	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 de+l av+++ g++Wk+Ia ++ Rt+ qc +rwqk+l Oeu008284.1 28 DEILRMAVQRFKGKNWKKIADCFK-DRTDVQCLHRWQKVL 66 89*******************9.**********986 PP
2	Myb_DNA-binding	61.7	1.6e-19	72	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++v+++G++ W+tI+++++ gR +kqc++rw+++l Oeu008284.1 72 KGPWSKEEDEMIIHCVNKYGPKKWSTISKHLP-GRIGKQCRERWHNHL 118 79****************************.***********97 PP
3	Myb_DNA-binding	49	1.4e-15	124	166	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ Oeu008284.1 124 KDAWTQEEELALIHAHQIYGNK-WAELTKFLP-GRTDNAIKNHWN 166 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 788 aa Download sequence
MAPEIVYKEF SLCTGNFLRS QEMIILQDEI LRMAVQRFKG KNWKKIADCF KDRTDVQCLH 60 RWQKVLDPEL IKGPWSKEED EMIIHCVNKY GPKKWSTISK HLPGRIGKQC RERWHNHLNP 120 TINKDAWTQE EELALIHAHQ IYGNKWAELT KFLPGRTDNA IKNHWNSSIK KKLDTYLSSG 180 LLSQYQGPPI VSYRNQSVAS SSSKAQQSSE DDPVIKDRVE VGEASECSPH STVASLPQST 240 NDPINTIIRN RKNFGVSEES NHKKDQCSSS MTRSEDFRPA LPDNTFSMLE VPSEMSISSK 300 FLEHDLPLDW GPFAGKDWQL NPNELPDISL LDLGQEASGL LMQAINGSNH HDNIDFPPEA 360 SIELNASTAM GNMVMSSDMP NLVINSDFRV IYPEKGRDVF YPAENVGGGI DGSADSLLHQ 420 SSNFMIPKEG TFASKSCCST SSDMLGSSFS KPFPDPSELP PEDDGLVMYG IDTYQLNDSL 480 DGNAEQKSVL EDGCFCCEYG SEQANCSQKL VPINGFAFAS NDAQSCSSRD KDPVLTDEQN 540 DCGALFYDSP CFPSLDIPFF SCDLVQPGSD MQQGYSPLGI RQLMISSLNS FKWWDSPSRE 600 DSSDAVQKSI AKTFTDAPSI LKKRRRDLVS PLSENRSLKQ LESDLRQDSL SNLSIECSGL 660 EAVCDECVDQ KVLMLSSSPN DRRNSESTWV DKENVIPDFE EGREEGNKSF VISGSRMLQK 720 ELNSSEFMKI KQQSAIMDIK NMAGGNDSVK TGRTLDFNEC GTPVKKAEKL SSSIGCSSPF 780 PHLKSFR*

Sequence ? help Back to Top

Protein Sequence Length: 788 aa Download sequence

MAPEIVYKEF SLCTGNFLRS QEMIILQDEI LRMAVQRFKG KNWKKIADCF KDRTDVQCLH  60
RWQKVLDPEL IKGPWSKEED EMIIHCVNKY GPKKWSTISK HLPGRIGKQC RERWHNHLNP  120
TINKDAWTQE EELALIHAHQ IYGNKWAELT KFLPGRTDNA IKNHWNSSIK KKLDTYLSSG  180
LLSQYQGPPI VSYRNQSVAS SSSKAQQSSE DDPVIKDRVE VGEASECSPH STVASLPQST  240
NDPINTIIRN RKNFGVSEES NHKKDQCSSS MTRSEDFRPA LPDNTFSMLE VPSEMSISSK  300
FLEHDLPLDW GPFAGKDWQL NPNELPDISL LDLGQEASGL LMQAINGSNH HDNIDFPPEA  360
SIELNASTAM GNMVMSSDMP NLVINSDFRV IYPEKGRDVF YPAENVGGGI DGSADSLLHQ  420
SSNFMIPKEG TFASKSCCST SSDMLGSSFS KPFPDPSELP PEDDGLVMYG IDTYQLNDSL  480
DGNAEQKSVL EDGCFCCEYG SEQANCSQKL VPINGFAFAS NDAQSCSSRD KDPVLTDEQN  540
DCGALFYDSP CFPSLDIPFF SCDLVQPGSD MQQGYSPLGI RQLMISSLNS FKWWDSPSRE  600
DSSDAVQKSI AKTFTDAPSI LKKRRRDLVS PLSENRSLKQ LESDLRQDSL SNLSIECSGL  660
EAVCDECVDQ KVLMLSSSPN DRRNSESTWV DKENVIPDFE EGREEGNKSF VISGSRMLQK  720
ELNSSEFMKI KQQSAIMDIK NMAGGNDSVK TGRTLDFNEC GTPVKKAEKL SSSIGCSSPF  780
PHLKSFR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-145	MYB family protein