PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YB | ||||||||
Protein Properties | Length: 144aa MW: 15989.2 Da PI: 4.4561 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 70.1 | 3.8e-22 | 2 | 74 | 14 | 86 |
NF-YB 14 srimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86 ++i+k++lP + ++++da++++ ec +efi +++se+++ c re+r+ti+++ +l al +lGf +y+e++ + Oeu008246.1 2 TKIIKEMLPPDVRVARDAQDLIIECCVEFINLISSESNEVCGREERRTIAPEHVLKALQDLGFGEYIEEVYAA 74 68******************************************************************98654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MTKIIKEMLP PDVRVARDAQ DLIIECCVEF INLISSESNE VCGREERRTI APEHVLKALQ 60 DLGFGEYIEE VYAAYEQHKL ETVDAVRTGK LSNVAEMTEE QALAEQQRMF AEARARMNGG 120 IAVPKQPEPV PQGPQPPQPS LNT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23090.4 | 1e-73 | NF-YB family protein |