PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu008112.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 355aa MW: 38046.3 Da PI: 9.4168

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu008112.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.2	8.4e-42	68	143	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+ dls+ k y++rhkvC +hsk +v+v+gleqrfCqqCsrfh+lsefD++krsCrrrLa+hnerrrk+ Oeu008112.1 68 RCQVEGCQIDLSDSKAYYSRHKVCGMHSKFRKVIVAGLEQRFCQQCSRFHQLSEFDQGKRSCRRRLAGHNERRRKP 143 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MEKGCASGAQ DSLNSLNFGK KIYFEDVGSG VQAKTGCGPS PVVAFGLPPP VPAKKGRGGG 60 VQGGQPPRCQ VEGCQIDLSD SKAYYSRHKV CGMHSKFRKV IVAGLEQRFC QQCSRFHQLS 120 EFDQGKRSCR RRLAGHNERR RKPPPGSPFS TRYGNFSSSI FETHGRNGGF VMDFSLYPSP 180 SGRTLWPNML SSERGLGNQV TVTSKFLPPW HSNPDNPPSI LLQGSTTSAS YPGPGLSSGS 240 FSGVSDSVCA RSLLSNQPWG SRNIPSSPGL NTLYGANGTS VVQPSVAHGT PFGNFLSLPW 300 GFKDNQASTD LGSHPANSQY SSELETARQG GGQFHELELS TGYTSSVEHM HWSH*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MEKGCASGAQ DSLNSLNFGK KIYFEDVGSG VQAKTGCGPS PVVAFGLPPP VPAKKGRGGG  60
VQGGQPPRCQ VEGCQIDLSD SKAYYSRHKV CGMHSKFRKV IVAGLEQRFC QQCSRFHQLS  120
EFDQGKRSCR RRLAGHNERR RKPPPGSPFS TRYGNFSSSI FETHGRNGGF VMDFSLYPSP  180
SGRTLWPNML SSERGLGNQV TVTSKFLPPW HSNPDNPPSI LLQGSTTSAS YPGPGLSSGS  240
FSGVSDSVCA RSLLSNQPWG SRNIPSSPGL NTLYGANGTS VVQPSVAHGT PFGNFLSLPW  300
GFKDNQASTD LGSHPANSQY SSELETARQG GGQFHELELS TGYTSSVEHM HWSH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	3e-49	SBP family protein