PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007928.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 454aa MW: 50968.2 Da PI: 6.4012

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007928.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.6e-17	156	205	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Oeu007928.1 156 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 205 78*****************......55**********************997 PP
2	AP2	41.3	3.8e-13	248	295	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a++ a+ k Oeu007928.1 248 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDIAAIK 295 89******.7**5553..2.26******99*******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MWNLNYSPDQ RMDEGERGKR VGSEWNFSSA SLVPVEDGLS EEEEDAERSC GDGNKKRSSK 60 IFGFSVSHDG DDDDDDIGPC SLGSEPPVTR QFFPVDESET TVTSGGGAAP DFPRAHWMGV 120 KFCQSDPNTV GVLGKSAAEV SQPLRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ 180 VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFCLDDYEED LKQMRNLTKE EFVHVLRRQS 240 TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEVEAARAYD IAAIKSNGKE 300 AVTNFDPSIY EELKAPDSSS NASEHNLDLS LGNLASKPSS REFGDNVHHA RDQHSSSLQF 360 ELEWQRRGLM PKHQVSPIDN DLQRRDVFNE TDTTQLLSQT HLYSPGSMKV NEMHRYGQFV 420 KAKEPHMLQM FSPSFSPQNF QFSSSSNGGS IWS*

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MWNLNYSPDQ RMDEGERGKR VGSEWNFSSA SLVPVEDGLS EEEEDAERSC GDGNKKRSSK  60
IFGFSVSHDG DDDDDDIGPC SLGSEPPVTR QFFPVDESET TVTSGGGAAP DFPRAHWMGV  120
KFCQSDPNTV GVLGKSAAEV SQPLRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ  180
VYLGGFDTAH AAARAYDRAA IKFRGVEADI NFCLDDYEED LKQMRNLTKE EFVHVLRRQS  240
TGFPRGSSKY RGVTLHKCGR WEARMGQFLG KKYVYLGLFD TEVEAARAYD IAAIKSNGKE  300
AVTNFDPSIY EELKAPDSSS NASEHNLDLS LGNLASKPSS REFGDNVHHA RDQHSSSLQF  360
ELEWQRRGLM PKHQVSPIDN DLQRRDVFNE TDTTQLLSQT HLYSPGSMKV NEMHRYGQFV  420
KAKEPHMLQM FSPSFSPQNF QFSSSSNGGS IWS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-117	AP2 family protein