PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 133aa MW: 15012.1 Da PI: 4.6653 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 86.1 | 5e-27 | 2 | 74 | 29 | 101 |
DUF260 29 kfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 kf ++hk+FGasn++kll+++pe++reda++s+vyeA+ar+rdPvyG++g i +lq+q+ +l++ela++++++ Oeu007696.1 2 KFLMAHKVFGASNIIKLLQRIPENQREDAVNSMVYEANARLRDPVYGCAGAICQLQKQVIELQTELAKAQAQI 74 799******************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence |
MKFLMAHKVF GASNIIKLLQ RIPENQREDA VNSMVYEANA RLRDPVYGCA GAICQLQKQV 60 IELQTELAKA QAQILNMNMK SHEITNSADF FPAQMLQYQE ICVPQQLCDN LSSSFSDDNE 120 LRVADNLEPF WS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 5e-37 | LBD family protein |